RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 KIF5AQ12840 1032 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 TARDBPQ13148 414 aaKnown RBP eCLIP20.79■□□□□ 0.921e-9■■■■■ 37.6
TOP3A-218ENST00000584669 INPP5AQ14642 412 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 ACOX1Q15067 660 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 PRKD1Q15139 912 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-218ENST00000584669 DENND2CQ68D51 928 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 TSPAN33Q86UF1 283 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 PDZD3Q86UT5 571 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 NT5DC3Q86UY8 548 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 PARGQ86W56 976 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 IFT43Q96FT9 208 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 AGAP3Q96P47 875 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 HERPUD2Q9BSE4 406 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 TDRD1Q9BXT4 1180 aaKnown RBP20.79■□□□□ 0.92
TOP3A-218ENST00000584669 PPIL1Q9Y3C6 166 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 AK5Q9Y6K8 562 aa20.79■□□□□ 0.92
TOP3A-218ENST00000584669 HEXIM1O94992 359 aaKnown RBP20.78■□□□□ 0.92
TOP3A-218ENST00000584669 PRLP01236 227 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 CSF2P04141 144 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 CYP2A6P11509 494 aaPredicted RBP20.78■□□□□ 0.92
TOP3A-218ENST00000584669 PEX5P50542 639 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 YPEL5P62699 121 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 SKOR1P84550 965 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 ZNF211Q13398 564 aaPredicted RBP20.78■□□□□ 0.92
TOP3A-218ENST00000584669 ILKQ13418 452 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 PPP2R5EQ16537 467 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 PROX2Q3B8N5 592 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 AADACL2Q6P093 401 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 HSD11B1LQ7Z5J1 315 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 ZC3H18Q86VM9 953 aaKnown RBP20.78■□□□□ 0.92
TOP3A-218ENST00000584669 PELI3Q8N2H9 469 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 ALG3Q92685 438 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 P3H4Q92791 437 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 SCRN2Q96FV2 425 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 COQ10AQ96MF6 247 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 MCCC1Q96RQ3 725 aaPredicted RBP20.78■□□□□ 0.92
TOP3A-218ENST00000584669 APOOQ9BUR5 198 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 BRD8Q9H0E9 1235 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 OR1A2Q9Y585 309 aa20.78■□□□□ 0.92
TOP3A-218ENST00000584669 SCN8AQ9UQD0 1980 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 CCDC66A2RUB6 948 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 NME1P15531 152 aaKnown RBP20.77■□□□□ 0.92
TOP3A-218ENST00000584669 EPHB1P54762 984 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 PTK2BQ14289 1009 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 MACC1Q6ZN28 852 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 NYAP1Q6ZVC0 841 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 BBS12Q6ZW61 710 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 USP45Q70EL2 814 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 BZW1Q7L1Q6 419 aaKnown RBP20.77■□□□□ 0.92
TOP3A-218ENST00000584669 RBFAQ8N0V3 343 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 OR4C6Q8NH72 309 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 TFB1MQ8WVM0 346 aaKnown RBP20.77■□□□□ 0.92
TOP3A-218ENST00000584669 RBM15Q96T37 977 aaKnown RBP eCLIP20.77■□□□□ 0.92
TOP3A-218ENST00000584669 TCEAL2Q9H3H9 227 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-218ENST00000584669 PCDH9Q9HC56 1237 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 PACSIN2Q9UNF0 486 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-218ENST00000584669 ADGRG1Q9Y653 693 aa20.77■□□□□ 0.92
TOP3A-218ENST00000584669 ZFC3H1O60293 1989 aaKnown RBP20.76■□□□□ 0.91
TOP3A-218ENST00000584669 A0A0J9YYE9 177 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 TOR1BO14657 336 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 FTCDO95954 541 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 TRBC1P01850 177 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 GIMD1P0DJR0 217 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 JUNDP17535 347 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 NFKBIAP25963 317 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 PTPN3P26045 913 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 RWDD2BP57060 319 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 COPS2P61201 443 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 HNRNPKP61978 463 aaKnown RBP eCLIP20.76■□□□□ 0.91
TOP3A-218ENST00000584669 MTM1Q13496 603 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 PEX26Q7Z412 305 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 CBARPQ8N350 705 aaPredicted RBP20.76■□□□□ 0.91
TOP3A-218ENST00000584669 TXLNBQ8N3L3 684 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 ZNF548Q8NEK5 533 aaPredicted RBP20.76■□□□□ 0.91
TOP3A-218ENST00000584669 LPCAT1Q8NF37 534 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 NUS1Q96E22 293 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 AMFRQ9UKV5 643 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 CAPN6Q9Y6Q1 641 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 ASXL3Q9C0F0 2248 aa20.76■□□□□ 0.91
TOP3A-218ENST00000584669 H3BM21 787 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 K7ESM1 405 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 ALPPL2P10696 532 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 PYGMP11217 842 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 CA4P22748 312 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 ACP1P24666 158 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 ETV3P41162 512 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 ARHGEF7Q14155 803 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 NFATC4Q14934 902 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 TEX44Q53QW1 395 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 LRRC66Q68CR7 880 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 CRTC1Q6UUV9 634 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 RFLNAQ6ZTI6 216 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 Q6ZVL8 140 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 PHACTR4Q8IZ21 702 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 NDUFAF2Q8N183 169 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 IMP4Q96G21 291 aaKnown RBP20.75■□□□□ 0.91
TOP3A-218ENST00000584669 OSBPL8Q9BZF1 889 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 C10orf88Q9H8K7 445 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 CLCA2Q9UQC9 943 aa20.75■□□□□ 0.91
TOP3A-218ENST00000584669 ARHGEF17Q96PE2 2063 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms