RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 A0A1B0GVM2 712 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PRAC2D3DTV9 90 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 NPIPB11E5RHQ5 1161 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 CBX6O95503 412 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 CAVIN2O95810 425 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 HOXB7P09629 217 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 CHN1P15882 459 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 DCTDP32321 178 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 SKIV2L2P42285 1042 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RPS6KA3P51812 740 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 AP2B1P63010 937 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 NECTIN1Q15223 517 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 TAF7Q15545 349 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PDCD2Q16342 344 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PFKFB4Q16877 469 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 XKR9Q5GH70 373 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 AADACL2Q6P093 401 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 ZNF449Q6P9G9 518 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RHBDF2Q6PJF5 856 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RUFY3Q7L099 469 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RRAGAQ7L523 313 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 SMIM29Q86T20 159 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PATL1Q86TB9 770 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 UNC5CLQ8IV45 518 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 CNTROBQ8N137 903 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PGBD5Q8N414 524 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PDCL2Q8N4E4 241 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PTGR2Q8N8N7 351 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 ZNF527Q8NB42 609 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 POC1AQ8NBT0 407 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RUFY2Q8WXA3 655 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 CCT6BQ92526 530 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RILPL2Q969X0 211 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 KIF1BPQ96EK5 621 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 HYPKQ9NX55 129 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 ZNF69Q9UC07 566 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 HERC5Q9UII4 1024 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 TSPYL4Q9UJ04 414 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 EXOC6BQ9Y2D4 811 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 LRCH1Q9Y2L9 728 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 SLC45A1Q9Y2W3 748 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 DGKBQ9Y6T7 804 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 PTPRUQ92729 1446 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 ACEP12821 1306 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 IGSF1Q8N6C5 1336 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 RAD50Q92878 1312 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 N4BP2Q86UW6 1770 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 NALCNQ8IZF0 1738 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 XRN1Q8IZH2 1706 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 A0A0U1RQJ8 604 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 TULP2O00295 520 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 CLGNO14967 610 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 AP5Z1O43299 807 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 LMX1BO60663 402 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 CCDC192P0DO97 292 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 ARSAP15289 507 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 CCT5P48643 541 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 CYP4A11Q02928 519 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 GALNT1Q10472 559 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 DLG1Q12959 904 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 DHX34Q14147 1143 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 SETMARQ53H47 684 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 STPG1Q5TH74 334 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 KLHL17Q6TDP4 642 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 MMS22LQ6ZRQ5 1243 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 IL17REQ8NFR9 667 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 RFWD2Q8NHY2 731 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 NEK9Q8TD19 979 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 BICD1Q96G01 975 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 ZNF830Q96NB3 372 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 CRB3Q9BUF7 120 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 HERC2P3Q9BVR0 1158 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 ARFGAP3Q9NP61 516 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 THAP1Q9NVV9 213 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 TMEM51Q9NW97 253 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 OGFRQ9NZT2 677 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 NDUFAF4Q9P032 175 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 DHDHQ9UQ10 334 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 SMC3Q9UQE7 1217 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 MTMR6Q9Y217 621 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 CNPY2Q9Y2B0 182 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 RPS6KL1Q9Y6S9 549 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 NRXN3Q9Y4C0 1643 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 DIP2AQ14689 1571 aa4.19□□□□□ -1.74
SMCHD1-208ENST00000583344 ITSN1Q15811 1721 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 SBNO1A3KN83 1393 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 FLT4P35916 1363 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 A0A087WV62 115 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 A0A0U1RQG5 324 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 hCG_1642624A0A1W2PR95 340 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 FAM90A20PA6NIJ5 464 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 HIP1O00291 1037 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 SYT5O00445 386 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 STRNO43815 780 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 XPNPEP2O43895 674 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 NEMFO60524 1076 aa4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 SURF6O75683 361 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-208ENST00000583344 CH25HO95992 272 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms