RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 HERC6Q8IVU3 1022 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 ACVR1CQ8NER5 493 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 TNIP2Q8NFZ5 429 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 MARK4Q96L34 752 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 CRISPLD1Q9H336 500 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 FBXO44Q9H4M3 255 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 SPAG4Q9NPE6 437 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 TLR6Q9Y2C9 796 aa13.67□□□□□ -0.22
GGA3-214ENST00000582717 MYLKQ15746 1914 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 E7ENX8 843 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 CACNG3O60359 315 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 VNN2O95498 520 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 SLC35E2BP0CK96 405 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 FGFR3P22607 806 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 DNAJB13P59910 316 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 BFSP2Q13515 415 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 LRP8Q14114 963 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 PSMD5Q16401 504 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 AFMIDQ63HM1 303 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 PPP4R4Q6NUP7 873 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 HACD2Q6Y1H2 254 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 Q6ZNX1 250 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 TMEM173Q86WV6 379 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 KLHDC8BQ8IXV7 354 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 FSTL5Q8N475 847 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 FIBCD1Q8N539 461 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 FAM156AQ8NDB6 213 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 KCTD4Q8WVF5 259 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 LPGAT1Q92604 370 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 TMIGD2Q96BF3 282 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 IL12RB2Q99665 862 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.66□□□□□ -0.22
GGA3-214ENST00000582717 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 CACNA2D2Q9NY47 1150 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 IL37Q9NZH6 218 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 ACOT9Q9Y305 439 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 SNX13Q9Y5W8 968 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 DOCK4Q8N1I0 1966 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 OR6C75A6NL08 312 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 MT-CYBP00156 380 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 HSPA8P11142 646 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 BMP2P12643 396 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 NDST2P52849 883 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 EFEMP1Q12805 493 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 ZBED5Q49AG3 693 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 MTX3Q5HYI7 312 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 DUS1LQ6P1R4 473 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 GK5Q6ZS86 529 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 PATL1Q86TB9 770 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 CENPLQ8N0S6 344 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 LZTR1Q8N653 840 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 ZNF296Q8WUU4 475 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 ZNF512Q96ME7 567 aaPredicted RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 RANBP9Q96S59 729 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 MRPL46Q9H2W6 279 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 NOL6Q9H6R4 1146 aaKnown RBP13.66□□□□□ -0.22
GGA3-214ENST00000582717 CHRAC1Q9NRG0 131 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 XPR1Q9UBH6 696 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
GGA3-214ENST00000582717 MTMR11A4FU01 709 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 PHGDHO43175 533 aaKnown RBP13.65□□□□□ -0.22
GGA3-214ENST00000582717 PSMD3O43242 534 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 TBX18O95935 607 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 HLA-DQB2P05538 268 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 CPB1P15086 417 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 TPP2P29144 1249 aaPredicted RBP13.65□□□□□ -0.22
GGA3-214ENST00000582717 TBX4P57082 545 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 NHSL2Q5HYW2 709 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 RTP2Q5QGT7 225 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 REP15Q6BDI9 236 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 FAM45BPQ6NSW5 357 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 FUT10Q6P4F1 479 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 ZBTB49Q6ZSB9 765 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 ZNF683Q8IZ20 524 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 MYO1HQ8N1T3 1032 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 PCDH20Q8N6Y1 951 aaKnown RBP13.65□□□□□ -0.22
GGA3-214ENST00000582717 CCNYL1Q8N7R7 359 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 MFSD2AQ8NA29 543 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 FAM45AQ8TCE6 357 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 ADAMTS16Q8TE57 1224 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 SLCO4A1Q96BD0 722 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 GLOD4Q9HC38 313 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 CD300AQ9UGN4 299 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 CNOT6Q9ULM6 557 aaKnown RBP13.65□□□□□ -0.22
GGA3-214ENST00000582717 SH3GLB1Q9Y371 365 aa13.65□□□□□ -0.22
GGA3-214ENST00000582717 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
GGA3-214ENST00000582717 FAM92AA1XBS5 289 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms