RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MRGPRX2Q96LB1 330 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 SRPK1Q96SB4 655 aaKnown RBP15.56■□□□□ 0.08
SS18-216ENST00000580751 FMO2Q99518 471 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 GORASP1Q9BQQ3 440 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 MLPHQ9BV36 600 aaPredicted RBP15.56■□□□□ 0.08
SS18-216ENST00000580751 B4GALT6Q9UBX8 382 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 SUSD2Q9UGT4 822 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 NFU1Q9UMS0 254 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 DMTF1Q9Y222 760 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 CEP192Q8TEP8 1941 aa15.56■□□□□ 0.08
SS18-216ENST00000580751 RIF1Q5UIP0 2472 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 LOC285095A0A1B0GVY8 99 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 A0A1W2PPC4 97 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 NPIPB15A6NHN6 443 aaPredicted RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 E7EVH7 732 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 TP73O15350 636 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 EIF3HO15372 352 aaKnown RBP eCLIP15.55■□□□□ 0.08
SS18-216ENST00000580751 SUN1O94901 812 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 FGF1P05230 155 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 RETP07949 1114 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 ELFN1P0C7U0 828 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 MLNP12872 115 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 HLA-DPA1P20036 260 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 ITPKAP23677 461 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 MAT2AP31153 395 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 VPS41P49754 854 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 CREB5Q02930 508 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 RALGDSQ12967 914 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 SGCGQ13326 291 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 ARHGEF7Q14155 803 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 GALNT3Q14435 633 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 KCNJ11Q14654 390 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 QPCTQ16769 361 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 ZNF284Q2VY69 593 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 SEL1L3Q68CR1 1132 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 KDELC2Q7Z4H8 507 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 RABEPKQ7Z6M1 372 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 SYT12Q8IV01 421 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 FBXO25Q8TCJ0 367 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 AENQ8WTP8 325 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 ASB12Q8WXK4 309 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 LYSMD1Q96S90 227 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 WRAP53Q9BUR4 548 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 C1QTNF7Q9BXJ2 289 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 LRRC40Q9H9A6 602 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 ETNK1Q9HBU6 452 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 XAB2Q9HCS7 855 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 ARFGAP3Q9NP61 516 aa15.55■□□□□ 0.08
SS18-216ENST00000580751 EIF2B4Q9UI10 523 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 ZFR2Q9UPR6 939 aaKnown RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 EP300Q09472 2414 aaPredicted RBP15.55■□□□□ 0.08
SS18-216ENST00000580751 TNRC6BQ9UPQ9 1833 aaKnown RBP15.54■□□□□ 0.08
SS18-216ENST00000580751 FRYLO94915 3013 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 IGLON5A6NGN9 336 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 PSMD11O00231 422 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 TM7SF2O76062 418 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 ALPIP09923 528 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 GNSP15586 552 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 ZNF30P17039 623 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 CTPS1P17812 591 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 HNF1BP35680 557 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 LIG3P49916 1009 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 BASP1P80723 227 aaKnown RBP15.54■□□□□ 0.08
SS18-216ENST00000580751 SLC1A5Q15758 541 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 FAXCQ5TGI0 409 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 PEAR1Q5VY43 1037 aaPredicted RBP15.54■□□□□ 0.08
SS18-216ENST00000580751 NAPEPLDQ6IQ20 393 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 LINC00523Q86TU6 105 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 PIGKQ92643 395 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 FICDQ9BVA6 458 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 C1QTNF2Q9BXJ5 285 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 SLC17A9Q9BYT1 436 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 MIR1-1HGQ9H1L0 117 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 NCDNQ9UBB6 729 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 PILRBQ9UKJ0 227 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 TRPM6Q9BX84 2022 aa15.54■□□□□ 0.08
SS18-216ENST00000580751 USP34Q70CQ2 3546 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 ATXN2Q99700 1313 aaKnown RBP15.53■□□□□ 0.08
SS18-216ENST00000580751 LZTS3O60299 673 aaPredicted RBP15.53■□□□□ 0.08
SS18-216ENST00000580751 MMP20O60882 483 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 AP2A1O95782 977 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 APRTP07741 180 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 ATXN1LP0C7T5 689 aaKnown RBP15.53■□□□□ 0.08
SS18-216ENST00000580751 C6P13671 934 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 HNRNPA2B1P22626 353 aaKnown RBP15.53■□□□□ 0.08
SS18-216ENST00000580751 LHCGRP22888 699 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 AKT2P31751 481 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 ADRA1AP35348 466 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 MPLP40238 635 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 LMAN1P49257 510 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 SEMG2Q02383 582 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 TRADDQ15628 312 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 CNGA3Q16281 694 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 SIRPB2Q5JXA9 342 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 KCTD11Q693B1 232 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 LIPIQ6XZB0 460 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 PRUNE1Q86TP1 453 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 PDIK1LQ8N165 341 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 MREGQ8N565 214 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 TAB3Q8N5C8 712 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms