RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FAM153AQ9UHL3 310 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 RSPH14Q9UHP6 348 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 ZNF148Q9UQR1 794 aa9.93□□□□□ -0.82
GGA3-209ENST00000580646 AAR2Q9Y312 384 aaKnown RBP9.93□□□□□ -0.82
GGA3-209ENST00000580646 A0A0J9YYE9 177 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 LOC285095A0A1B0GVY8 99 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 A0A1W2PQU0 124 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 TTC24A2A3L6 582 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 GOLGA6CA6NDK9 693 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 GOLGA6BA6NDN3 693 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 ERI2A8K979 691 aaKnown RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 PRAMEF26H0Y7S4 382 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PSMD11O00231 422 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 SPINT1O43278 529 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PHF2O75151 1096 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PCDH8O95206 1070 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PRLP01236 227 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 TRBC1P01850 177 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 GOLGA6DP0CG33 693 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 CYP2A6P11509 494 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 XPAP23025 273 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 MMP12P39900 470 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 ABL2P42684 1182 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 GRK6P43250 576 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 GEMP55040 296 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 GDF10P55107 478 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 NXPH1P58417 271 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 RPS21P63220 83 aaKnown RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 IL9RQ01113 521 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PRPSAP1Q14558 356 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 STAT4Q14765 748 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 TMEM259Q4ZIN3 620 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 SETMARQ53H47 684 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 KDELC1Q6UW63 502 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 SYT10Q6XYQ8 523 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 ARHGEF18Q6ZSZ5 1173 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 B4GALNT4Q76KP1 1039 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 DPPA4Q7L190 304 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 RAB44Q7Z6P3 723 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 SLCO6A1Q86UG4 719 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 IQCHQ86VS3 1027 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 HORMAD1Q86X24 394 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PNPLA1Q8N8W4 532 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 FAM71DQ8N9W8 422 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 ATL2Q8NHH9 583 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 BAHD1Q8TBE0 780 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 FAM174AQ8TBP5 190 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 C1orf54Q8WWF1 131 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 ADAMTS14Q8WXS8 1223 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 KLK6Q92876 244 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 LRRC45Q96CN5 670 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 SCRN2Q96FV2 425 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 RUNDC3BQ96NL0 473 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 TRIB3Q96RU7 358 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 RBM15Q96T37 977 aaKnown RBP eCLIP9.92□□□□□ -0.82
GGA3-209ENST00000580646 ADGRE3Q9BY15 652 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 KCTD5Q9NXV2 234 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 GOLGA6AQ9NYA3 693 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 FEZ2Q9UHY8 353 aaPredicted RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 APOBEC2Q9Y235 224 aaKnown RBP9.92□□□□□ -0.82
GGA3-209ENST00000580646 BTBD3Q9Y2F9 522 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 NEUROG3Q9Y4Z2 214 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 CABIN1Q9Y6J0 2220 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 CEP295Q9C0D2 2601 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 MYLKQ15746 1914 aa9.92□□□□□ -0.82
GGA3-209ENST00000580646 ANKRD66B4E2M5 251 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 CCDC188H7C350 402 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 ZNF185O15231 689 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 SLC31A1O15431 190 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 PSMD3O43242 534 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 MAGEC1O60732 1142 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 NDST3O95803 873 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 MT-CYBP00156 380 aaPredicted RBP9.91□□□□□ -0.82
GGA3-209ENST00000580646 PDHA1P08559 390 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 ZNF30P17039 623 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 HLA-DPA1P20036 260 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 FDFT1P37268 417 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 COILP38432 576 aaPredicted RBP9.91□□□□□ -0.82
GGA3-209ENST00000580646 PAFAH1B1P43034 410 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 CDK18Q07002 472 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 OVGP1Q12889 678 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 SHBQ15464 509 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 ZNF284Q2VY69 593 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 CCDC137Q6PK04 289 aaKnown RBP9.91□□□□□ -0.82
GGA3-209ENST00000580646 USP45Q70EL2 814 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 SPATS2Q86XZ4 545 aaKnown RBP9.91□□□□□ -0.82
GGA3-209ENST00000580646 GATAD2AQ86YP4 633 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 CCDC89Q8N998 374 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 DENND6BQ8NEG7 585 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 CCDC110Q8TBZ0 833 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 CXorf40AQ8TE69 158 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 GRK7Q8WTQ7 553 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 PDCD6IPQ8WUM4 868 aaKnown RBP9.91□□□□□ -0.82
GGA3-209ENST00000580646 SLCO2A1Q92959 643 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 MAGOHBQ96A72 148 aaKnown RBP9.91□□□□□ -0.82
GGA3-209ENST00000580646 IFT43Q96FT9 208 aa9.91□□□□□ -0.82
GGA3-209ENST00000580646 OXNAD1Q96HP4 312 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms