RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PARVAQ9NVD7 372 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 PISDQ9UG56 409 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 PNMA8BQ9ULN7 279 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 LOXL2Q9Y4K0 774 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 OR1A2Q9Y585 309 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 EEF2KO00418 725 aaKnown RBP13.42□□□□□ -0.26
TRAF4-214ENST00000580073 NUDT21O43809 227 aaKnown RBP13.42□□□□□ -0.26
TRAF4-214ENST00000580073 PRAMEF11O60813 436 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 PALMO75781 387 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 CELA2BP08218 269 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-214ENST00000580073 HOXC4P09017 264 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-214ENST00000580073 MYBL1P10243 752 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 TCF4P15884 667 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 RENBPP51606 427 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 AP1S1P61966 158 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 CCL7P80098 99 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 C14orf28Q4W4Y0 310 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 MANEAQ5SRI9 462 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 TMCO4Q5TGY1 634 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 CYP4V2Q6ZWL3 525 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-214ENST00000580073 PRICKLE2Q7Z3G6 844 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 B3GNT8Q7Z7M8 397 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 PYROXD2Q8N2H3 581 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 BBS5Q8N3I7 341 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 PEBP4Q96S96 227 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 NUP85Q9BW27 656 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 FOXP3Q9BZS1 431 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 LRRC19Q9H756 370 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 PDFQ9HBH1 243 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 AP4E1Q9UPM8 1137 aa13.42□□□□□ -0.26
TRAF4-214ENST00000580073 AHCTF1Q8WYP5 2266 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-214ENST00000580073 B4DGG1 531 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 INSIG1O15503 277 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 DAPK3O43293 454 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 H2AFZP0C0S5 128 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 KCNC4Q03721 635 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 BIRC2Q13490 618 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 GSE1Q14687 1217 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 CYTH1Q15438 398 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 H2AFVQ71UI9 128 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 DPPA4Q7L190 304 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 SPRED1Q7Z699 444 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 SRLQ86TD4 932 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 ACRBPQ8NEB7 543 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 FAM46DQ8NEK8 389 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 VOPP1Q96AW1 172 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 BAG1Q99933 345 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-214ENST00000580073 GSDMCQ9BYG8 508 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 SEMA4CQ9C0C4 833 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 DPEP2Q9H4A9 486 aa13.41□□□□□ -0.26
TRAF4-214ENST00000580073 PHPT1Q9NRX4 125 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-214ENST00000580073 EPN1Q9Y6I3 576 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-214ENST00000580073 SDK2Q58EX2 2172 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 A0A1W2PQM1 296 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 HGSO14964 777 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 RNF8O76064 485 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 NDUFA10O95299 355 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 TMEM253P0C7T8 217 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 MYCLP1P12525 358 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 KRT10P13645 584 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 PSMA2P25787 234 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 HSPA9P38646 679 aaKnown RBP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 NSUN2Q08J23 767 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 ILF3Q12906 894 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 HLTFQ14527 1009 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 PSTKQ8IV42 348 aaKnown RBP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 CCDC170Q8IYT3 715 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 LZTR1Q8N653 840 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 COL26A1Q96A83 441 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 ECHDC3Q96DC8 303 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 NUS1Q96E22 293 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 TRIM11Q96F44 468 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 DPYSL5Q9BPU6 564 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 KLC2Q9H0B6 622 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 DHX35Q9H5Z1 703 aaKnown RBP13.4□□□□□ -0.26
TRAF4-214ENST00000580073 ZWILCHQ9H900 591 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 FGF22Q9HCT0 170 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 SEPT3Q9UH03 358 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 MOSPD1Q9UJG1 213 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 PCDHA13Q9Y5I0 950 aa13.4□□□□□ -0.26
TRAF4-214ENST00000580073 CFAP46Q8IYW2 2715 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 PRSS38A1L453 326 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 PMS2P1A4D2B8 440 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 RHPN2P1A8MT19 583 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 EFSO43281 561 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 SOCS5O75159 536 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 RECQL5O94762 991 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-214ENST00000580073 CPNE6O95741 557 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 CYP2A6P11509 494 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ITIH2P19823 946 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 IL1R2P27930 398 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 MAGEA1P43355 309 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms