RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 USP24Q9UPU5 2620 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 RCCD1A6NED2 376 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 PDE2AO00408 941 aaPredicted RBP14.85□□□□□ -0.03
SS18-212ENST00000579061 GCATO75600 419 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 PRLP01236 227 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 GP1BAP07359 652 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 ALPIP09923 528 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 TSHRP16473 764 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 LHCGRP22888 699 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 HNF1BP35680 557 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 VAV2P52735 878 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 EPHB1P54762 984 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 SRP54P61011 504 aaKnown RBP14.85□□□□□ -0.03
SS18-212ENST00000579061 ZBTB17Q13105 803 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 ELOCQ15369 112 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 PPP2R5EQ16537 467 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 ALG11Q2TAA5 492 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 LVRNQ6Q4G3 990 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 NPNTQ6UXI9 565 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 HSD11B1LQ7Z5J1 315 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 TECPR1Q7Z6L1 1165 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 NLRP8Q86W28 1048 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 TMEM139Q8IV31 216 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 HID1Q8IV36 788 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 TXLNBQ8N3L3 684 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 LRRN4Q8WUT4 740 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 FUBP1Q96AE4 644 aaKnown RBP14.85□□□□□ -0.03
SS18-212ENST00000579061 LYSMD1Q96S90 227 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 LRRC61Q9BV99 259 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 BOCQ9BWV1 1114 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 TCEAL2Q9H3H9 227 aaPredicted RBP14.85□□□□□ -0.03
SS18-212ENST00000579061 WDR26Q9H7D7 661 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 PCDH9Q9HC56 1237 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 KLQ9UEF7 1012 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 CHKBQ9Y259 395 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 REXO2Q9Y3B8 237 aaKnown RBP14.85□□□□□ -0.03
SS18-212ENST00000579061 OR1A2Q9Y585 309 aa14.85□□□□□ -0.03
SS18-212ENST00000579061 KMT2BQ9UMN6 2715 aaPredicted RBP14.85□□□□□ -0.03
SS18-212ENST00000579061 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 LY6G6EA0A0G2JKS1 128 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 CAPN8A6NHC0 703 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 CST8O60676 142 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 TNFP01375 233 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 ANXA6P08133 673 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 MMP2P08253 660 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 CTSEP14091 401 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 CTPS1P17812 591 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 COPS2P61201 443 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 DYNLT1P63172 113 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 SKOR1P84550 965 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 DPTQ07507 201 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 PRKD1Q15139 912 aaPredicted RBP14.84□□□□□ -0.03
SS18-212ENST00000579061 CRTC1Q6UUV9 634 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 Q6ZVL8 140 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 TSPAN33Q86UF1 283 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 NT5DC3Q86UY8 548 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 OR56A4Q8NGH8 313 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 GLMNQ92990 594 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 TSACCQ96A04 125 aaPredicted RBP14.84□□□□□ -0.03
SS18-212ENST00000579061 TEX101Q9BY14 249 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 CLPBQ9H078 707 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 SLC25A51Q9H1U9 297 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 PHPT1Q9NRX4 125 aaPredicted RBP14.84□□□□□ -0.03
SS18-212ENST00000579061 U3KQA8 63 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 RP1P56715 2156 aa14.84□□□□□ -0.03
SS18-212ENST00000579061 ARHGEF17Q96PE2 2063 aaPredicted RBP14.83□□□□□ -0.03
SS18-212ENST00000579061 MTSS1O43312 755 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 CAPNS1P04632 268 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 PYGLP06737 847 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 MYCLP1P12525 358 aaPredicted RBP14.83□□□□□ -0.04
SS18-212ENST00000579061 JUPP14923 745 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 CTNNA1P35221 906 aaKnown RBP14.83□□□□□ -0.04
SS18-212ENST00000579061 ETV3P41162 512 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 CD86P42081 329 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 PTSQ03393 145 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 C1orf61Q13536 156 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 CAMK2BQ13554 666 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 DEFB133Q30KQ1 61 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 TEX44Q53QW1 395 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 C6orf132Q5T0Z8 1188 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 HES3Q5TGS1 186 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 LRRC66Q68CR7 880 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 DENND2CQ68D51 928 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 ZNF765Q7L2R6 523 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 GKN2Q86XP6 184 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 NRSN1Q8IZ57 195 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.83□□□□□ -0.04
SS18-212ENST00000579061 PDCD7Q8N8D1 485 aaKnown RBP14.83□□□□□ -0.04
SS18-212ENST00000579061 ACRBPQ8NEB7 543 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 KIAA1524Q8TCG1 905 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 TFB1MQ8WVM0 346 aaKnown RBP14.83□□□□□ -0.04
SS18-212ENST00000579061 SCG3Q8WXD2 468 aaKnown RBP14.83□□□□□ -0.04
SS18-212ENST00000579061 KRT35Q92764 455 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 P3H4Q92791 437 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 TADA1Q96BN2 335 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 IMP4Q96G21 291 aaKnown RBP14.83□□□□□ -0.04
SS18-212ENST00000579061 RBM15Q96T37 977 aaKnown RBP eCLIP14.83□□□□□ -0.04
SS18-212ENST00000579061 ADGRE3Q9BY15 652 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 LACRTQ9GZZ8 138 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 DKK4Q9UBT3 224 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms