RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SFTPA2Q8IWL1 248 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PDCD6IPQ8WUM4 868 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SYN2Q92777 582 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 BTBD6Q96KE9 485 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 EPB41L5Q9HCM4 733 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ANAPC7Q9UJX3 599 aa16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 BZW2Q9Y6E2 419 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PIEZO2Q9H5I5 2752 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PRSS38A1L453 326 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 B4DGG1 531 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ERVH48-1M5A8F1 160 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 PLD2O14939 933 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 GLB1P16278 677 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MMP13P45452 471 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CDH6P55285 790 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 FANCCQ00597 558 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 EIF3IQ13347 325 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 RALGPS1Q5JS13 557 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ARHGAP40Q5TG30 622 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HSD11B1LQ7Z5J1 315 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 HEATR4Q86WZ0 1026 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CBARPQ8N350 705 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 BBS5Q8N3I7 341 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 FAM46DQ8NEK8 389 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CCL4L1Q8NHW4 92 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SNRNP27Q8WVK2 155 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 DTD2Q96FN9 168 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 MCCC1Q96RQ3 725 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NUP85Q9BW27 656 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 FOXP3Q9BZS1 431 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 LRRN3Q9H3W5 708 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CBX8Q9HC52 389 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CYP4F12Q9HCS2 524 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 IP6K2Q9UHH9 426 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 APPL1Q9UKG1 709 aa16.65■□□□□ 0.26
CDK5RAP3-206ENST00000578018 A0A087X0T9 212 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NPIPB15A6NHN6 443 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TMX2-CTNND1H3BSU7 103 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PSMD11O00231 422 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PDE2AO00408 941 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PGLSO95336 258 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SERPING1P05155 500 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CYP1A2P05177 515 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FAM228BP0C875 321 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PNLIPP16233 465 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NFKBIAP25963 317 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CCKBRP32239 447 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ETV3P41162 512 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 INHBCP55103 352 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 C19orf57Q0VDD7 668 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 HLTFQ14527 1009 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 C14orf28Q4W4Y0 310 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MARC1Q5VT66 337 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 DENND2CQ68D51 928 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SPECC1LQ69YQ0 1117 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SPRED1Q7Z699 444 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FAM71BQ8TC56 605 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NSMCE1Q8WV22 266 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CCDC97Q96F63 343 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TEX101Q9BY14 249 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 STRADBQ9C0K7 418 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PHPT1Q9NRX4 125 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 KCTD5Q9NXV2 234 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 RCOR3Q9P2K3 495 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MOSPD1Q9UJG1 213 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PHTF1Q9UMS5 762 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 RNF215Q9Y6U7 377 aa16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZFC3H1O60293 1989 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MFSD11O43934 449 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CEACAM5P06731 702 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CD48P09326 243 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CYP2A6P11509 494 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 IL4RP24394 825 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TEAD1P28347 426 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 UGT1A5P35504 534 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ZBED6P86452 979 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 RHDQ02161 417 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 VAC14Q08AM6 782 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 MMRN1Q13201 1228 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CLN3Q13286 438 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 KRT81Q14533 505 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 PTPRRQ15256 657 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ARMC12Q5T9G4 340 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 RAB11FIP2Q7L804 512 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TSPAN33Q86UF1 283 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 Q8N9G6 341 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 GPBAR1Q8TDU6 330 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 SCRN2Q96FV2 425 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 TMEM74Q96NL1 305 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FRMD8Q9BZ67 464 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 DPEP2Q9H4A9 486 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CARS2Q9HA77 564 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CAPN11Q9UMQ6 739 aa16.63■□□□□ 0.25
CDK5RAP3-206ENST00000578018 NUDT21O43809 227 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 FUCA1P04066 466 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 CCNB1P14635 433 aa16.62■□□□□ 0.25
CDK5RAP3-206ENST00000578018 ARSEP51690 589 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms