RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 DTD2Q96FN9 168 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 TMEM121Q9BTD3 319 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CDH19Q9H159 772 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 TRABDQ9H4I3 376 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 FZD3Q9NPG1 666 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 RAD18Q9NS91 495 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 DLL3Q9NYJ7 618 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 HACD3Q9P035 362 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 FEZ2Q9UHY8 353 aaPredicted RBP13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 TMEM131Q92545 1883 aa13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 TDRD6O60522 2096 aaKnown RBP13.91□□□□□ -0.18
SNORD3B-1-201ENST00000577988 SPTY2D1-AS1A0A0U1RR47 76 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 A0A1B0GTQ1 180 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 USP27XA6NNY8 438 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 A8MX80 341 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 PDE2AO00408 941 aaPredicted RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 TM4SF5O14894 197 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 PCDHGA12O60330 932 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 FGF1P05230 155 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 ALPIP09923 528 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 LHCGRP22888 699 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CXCR5P32302 372 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 IGFALSP35858 605 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CCT8P50990 548 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 STC1P52823 247 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CLDN2P57739 230 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 GNG11P61952 73 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 SEMG2Q02383 582 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 PTSQ03393 145 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 IRF4Q15306 451 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 PCSK7Q16549 785 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CDKN3Q16667 212 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 LRRC66Q68CR7 880 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 ESRP1Q6NXG1 681 aaKnown RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 DBX2Q6ZNG2 339 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 PTAR1Q7Z6K3 402 aaPredicted RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 SPATS2Q86XZ4 545 aaKnown RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 OR13H1Q8NG92 308 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CCDC110Q8TBZ0 833 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 ACTRT1Q8TDG2 376 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 C1orf54Q8WWF1 131 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 NUS1Q96E22 293 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 OXNAD1Q96HP4 312 aaPredicted RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 MRGPRX2Q96LB1 330 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 OSBPL9Q96SU4 736 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 MYOCQ99972 504 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 FSD1LQ9BXM9 530 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 FSCN3Q9NQT6 498 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 MBNL1Q9NR56 388 aaKnown RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 TM7SF3Q9NS93 570 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 UBP1Q9NZI7 540 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 COQ6Q9Y2Z9 468 aa13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 CNOT1A5YKK6 2376 aaKnown RBP13.9□□□□□ -0.18
SNORD3B-1-201ENST00000577988 C1orf232A0A0U1RR37 186 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ERI2A8K979 691 aaKnown RBP13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 H0Y8X5 98 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 TSHRP16473 764 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 GM2AP17900 193 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 CSRP1P21291 193 aaKnown RBP13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 KELP23276 732 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 PSMB4P28070 264 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 HTR1BP28222 390 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 TRIM23P36406 574 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 FDFT1P37268 417 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 THOP1P52888 689 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 PNCKQ6P2M8 343 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 RANBP10Q6VN20 620 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 Q6ZVL8 140 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 HSD11B1LQ7Z5J1 315 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 TMC3Q7Z5M5 1100 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 TSPAN33Q86UF1 283 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 IPMKQ8NFU5 416 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 APOOQ9BUR5 198 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ZFYVE1Q9HBF4 777 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ARNT2Q9HBZ2 717 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 PKD2L2Q9NZM6 624 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 USP34Q70CQ2 3546 aa13.89□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ARID1BQ8NFD5 2236 aaPredicted RBP13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 PGRMC1O00264 195 aaKnown RBP13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 CLDN7O95471 211 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ADRA1AP35348 466 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 SPINT3P49223 89 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 SNX1Q13596 522 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 GALNT3Q14435 633 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 INPP5AQ14642 412 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 INAVAQ3KP66 663 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 UAP1L1Q3KQV9 507 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 ZDHHC20Q5W0Z9 365 aa13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
SNORD3B-1-201ENST00000577988 DENND2CQ68D51 928 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms