RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ATP1A3P13637 1013 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 ERCC2P18074 760 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 TNFAIP3P21580 790 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 TEAD1P28347 426 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 ALDH4A1P30038 563 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 VIPR1P32241 457 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 CSTF2P33240 577 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 LBRQ14739 615 aaKnown RBP14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 LINC00303Q3SY05 128 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 PPP6R3Q5H9R7 873 aaPredicted RBP14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 RALGPS1Q5JS13 557 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 USP45Q70EL2 814 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 ZNF438Q7Z4V0 828 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 VASH2Q86V25 355 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 HEATR4Q86WZ0 1026 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 ZFAND4Q86XD8 727 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 ZSWIM9Q86XI8 627 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 EXD3Q8N9H8 876 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 AGBL5Q8NDL9 886 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 SPOCK2Q92563 424 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 ASPSCR1Q9BZE9 553 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 STN1Q9H668 368 aaKnown RBP14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 MRPL40Q9NQ50 206 aaKnown RBP14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 GOLGA6AQ9NYA3 693 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 B4GALT6Q9UBX8 382 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 SCINQ9Y6U3 715 aa14.22□□□□□ -0.13
SMARCD2-205ENST00000577686 CASC3O15234 703 aaKnown RBP14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 CAPN5O15484 640 aaPredicted RBP14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 ARL4AP40617 200 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 GNPDA1P46926 289 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 RGRP47804 291 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 HCAR3P49019 387 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 RAB15P59190 212 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 B4GALNT1Q00973 533 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 MYL5Q02045 173 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 NR1D2Q14995 579 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 TBR1Q16650 682 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 DTX1Q86Y01 620 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 IL22RA1Q8N6P7 574 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 COQ10AQ96MF6 247 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 ERGIC2Q96RQ1 377 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 SNRNP25Q9BV90 132 aaKnown RBP14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 SEMA6CQ9H3T2 930 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 SUDS3Q9H7L9 328 aaPredicted RBP14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 ANO10Q9NW15 660 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 GPATCH2LQ9NWQ4 482 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 FOXJ2Q9P0K8 574 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 TAAR2Q9P1P5 351 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 LIMA1Q9UHB6 759 aaKnown RBP14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 DNPEPQ9ULA0 475 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 MYO6Q9UM54 1294 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 PHTF1Q9UMS5 762 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 PCDHGA3Q9Y5H0 932 aa14.21□□□□□ -0.13
SMARCD2-205ENST00000577686 RP1P56715 2156 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 C9orf172C9J069 976 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 HEXIM1O94992 359 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 IVLP07476 585 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 FAM87AP0C7U9 286 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 SERPINB6P35237 376 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 ETV5P41161 510 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 MAZP56270 477 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 GPLD1P80108 840 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 C16orf72Q14CZ0 275 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 DENND2CQ68D51 928 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 RAET1GQ6H3X3 334 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 TMCO3Q6UWJ1 677 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 ZNF574Q6ZN55 896 aaPredicted RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 C17orf82Q86X59 251 aaPredicted RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 OR4D9Q8NGE8 314 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 FNIP1Q8TF40 1166 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 KIAA1143Q96AT1 154 aaPredicted RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 DTD2Q96FN9 168 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 AHCYL2Q96HN2 611 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 CCDC74BQ96LY2 380 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 CATSPER2Q96P56 530 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 TEFMQ96QE5 360 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 NUDCD1Q96RS6 583 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 KCTD15Q96SI1 283 aaPredicted RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 EFHD1Q9BUP0 239 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 DDA1Q9BW61 102 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 TEX101Q9BY14 249 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 SLC25A18Q9H1K4 315 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 RDH14Q9HBH5 336 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 GEMIN8Q9NWZ8 242 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 PCSK1NQ9UHG2 260 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 MGAQ8IWI9 3026 aa14.2□□□□□ -0.14
SMARCD2-205ENST00000577686 A8MX80 341 aa14.19□□□□□ -0.14
SMARCD2-205ENST00000577686 AGRPO00253 132 aa14.19□□□□□ -0.14
SMARCD2-205ENST00000577686 HTRA2O43464 458 aaPredicted RBP14.19□□□□□ -0.14
SMARCD2-205ENST00000577686 FGF1P05230 155 aa14.19□□□□□ -0.14
SMARCD2-205ENST00000577686 CA4P22748 312 aa14.19□□□□□ -0.14
SMARCD2-205ENST00000577686 LIMK2P53671 638 aa14.19□□□□□ -0.14
SMARCD2-205ENST00000577686 OR1D5P58170 312 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms