RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ESRP1Q6NXG1 681 aaKnown RBP11.9□□□□□ -0.5
LITAF-219ENST00000576334 TRIM74Q86UV6 250 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 PLD5Q8N7P1 536 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 OR56A4Q8NGH8 313 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 ARRDC2Q8TBH0 407 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 NSMCE1Q8WV22 266 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 MAML1Q92585 1016 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 NUS1Q96E22 293 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 NAF1Q96HR8 494 aaKnown RBP11.9□□□□□ -0.5
LITAF-219ENST00000576334 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 ZNF670Q9BS34 389 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 NRSN2Q9GZP1 204 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 CYP4F12Q9HCS2 524 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 RBM22Q9NW64 420 aaKnown RBP eCLIP11.9□□□□□ -0.5
LITAF-219ENST00000576334 ZNHIT6Q9NWK9 470 aaKnown RBP11.9□□□□□ -0.5
LITAF-219ENST00000576334 GOLGA6AQ9NYA3 693 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 DTLQ9NZJ0 730 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 PADI4Q9UM07 663 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 PHTF1Q9UMS5 762 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 GPR34Q9UPC5 381 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 ST14Q9Y5Y6 855 aa11.9□□□□□ -0.5
LITAF-219ENST00000576334 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 TOR1BO14657 336 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 MATN3O15232 486 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 SOD1P00441 154 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 TNFP01375 233 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 JCHAINP01591 159 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 GP1BAP07359 652 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 MMP2P08253 660 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 CCNB1P14635 433 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 HSPA9P38646 679 aaKnown RBP11.89□□□□□ -0.51
LITAF-219ENST00000576334 PDX1P52945 283 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 KIAA1024LP59773 190 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 GABREP78334 506 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 PDK2Q15119 407 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 ELOCQ15369 112 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 ISXQ2M1V0 245 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 LRRC66Q68CR7 880 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 HEATR4Q86WZ0 1026 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 CNTD1Q8N815 330 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 CCNYQ8ND76 341 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 SCAMP4Q969E2 229 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 CCDC74AQ96AQ1 378 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
LITAF-219ENST00000576334 DTD2Q96FN9 168 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 SCRN2Q96FV2 425 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 RNF157Q96PX1 679 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 MCCC1Q96RQ3 725 aaPredicted RBP11.89□□□□□ -0.51
LITAF-219ENST00000576334 RBM15Q96T37 977 aaKnown RBP eCLIP11.89□□□□□ -0.51
LITAF-219ENST00000576334 AGAP2Q99490 1192 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 POLR1EQ9GZS1 481 aaKnown RBP11.89□□□□□ -0.51
LITAF-219ENST00000576334 BRD8Q9H0E9 1235 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 WDR26Q9H7D7 661 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 PLEKHM1Q9Y4G2 1056 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 HEY1Q9Y5J3 304 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 ENTPD2Q9Y5L3 495 aa11.89□□□□□ -0.51
LITAF-219ENST00000576334 ARHGEF17Q96PE2 2063 aaPredicted RBP11.89□□□□□ -0.51
LITAF-219ENST00000576334 A0A087WV48 116 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 PRSS38A1L453 326 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 B4DGG1 531 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 CACNB4O00305 520 aaPredicted RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 CEACAM5P06731 702 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 KRT7P08729 469 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 CCNCP24863 283 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 AK4P27144 223 aaPredicted RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 MAN1A1P33908 653 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 BLKP51451 505 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 DYNLT1P63172 113 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 CCL7P80098 99 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 PTSQ03393 145 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 C3orf38Q5JPI3 329 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 RAET1GQ6H3X3 334 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 FOXR1Q6PIV2 292 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 DOK6Q6PKX4 331 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 TECPR1Q7Z6L1 1165 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 TAF8Q7Z7C8 310 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 B3GNT8Q7Z7M8 397 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 PDZD3Q86UT5 571 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 NRROSQ86YC3 692 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 CACTIN-AS1Q8N1I8 211 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 SDR16C5Q8N3Y7 309 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 FSTL5Q8N475 847 aaPredicted RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 ARL10Q8N8L6 244 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 Q8N9G6 341 aaPredicted RBP11.88□□□□□ -0.51
LITAF-219ENST00000576334 TC2NQ8N9U0 490 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 FAM46DQ8NEK8 389 aa11.88□□□□□ -0.51
LITAF-219ENST00000576334 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms