RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 TSPAN33Q86UF1 283 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 SLCO6A1Q86UG4 719 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 SLC25A45Q8N413 288 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 PLA2G15Q8NCC3 412 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 OR4C6Q8NH72 309 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 CCHCR1Q8TD31 782 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 ADAMTS14Q8WXS8 1223 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 MCCC1Q96RQ3 725 aaPredicted RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 OSBPL8Q9BZF1 889 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 PHPT1Q9NRX4 125 aaPredicted RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 KLK13Q9UKR3 277 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 GUCA1BQ9UMX6 200 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 RPL26L1Q9UNX3 145 aaKnown RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 C1orf232A0A0U1RR37 186 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 MIF4GDA9UHW6 222 aaKnown RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 HACD1B0YJ81 288 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 SCAMP1O15126 338 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 ARHGAP6O43182 974 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 TJP3O95049 919 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 FTCDO95954 541 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 TNFP01375 233 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 SLC4A1P02730 911 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 TSHRP16473 764 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 CKMT2P17540 419 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 LHCGRP22888 699 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 PTPN3P26045 913 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 SRP54P61011 504 aaKnown RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 SKOR1P84550 965 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 C1orf61Q13536 156 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 GALNT3Q14435 633 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 ELOCQ15369 112 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 TAZQ16635 292 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 DEFB133Q30KQ1 61 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 TEX44Q53QW1 395 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 ESRP1Q6NXG1 681 aaKnown RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 PNCKQ6P2M8 343 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 DHRS13Q6UX07 377 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 HSD11B1LQ7Z5J1 315 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 RAB44Q7Z6P3 723 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 CDKL3Q8IVW4 592 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 GALNT15Q8N3T1 639 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 CNTD1Q8N815 330 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 HTR3CQ8WXA8 447 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 SCG3Q8WXD2 468 aaKnown RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 GLMNQ92990 594 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 TSACCQ96A04 125 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 DTD2Q96FN9 168 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 COQ10AQ96MF6 247 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 QKIQ96PU8 341 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMG6-220ENST00000576218 MLPHQ9BV36 600 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 SLC25A51Q9H1U9 297 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 SUDS3Q9H7L9 328 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 GLOD4Q9HC38 313 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 CD84Q9UIB8 345 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 PACSIN2Q9UNF0 486 aaPredicted RBP15.26■□□□□ 0.03
SMG6-220ENST00000576218 NEUROG3Q9Y4Z2 214 aa15.26■□□□□ 0.03
SMG6-220ENST00000576218 F5H423 210 aaPredicted RBP15.25■□□□□ 0.03
SMG6-220ENST00000576218 TRIM38O00635 465 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 FZD6O60353 706 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 PMPCBO75439 489 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 CDK4P11802 303 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 GPR1P46091 355 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 DUSP3P51452 185 aaPredicted RBP15.25■□□□□ 0.03
SMG6-220ENST00000576218 HK3P52790 923 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 KIAA1024LP59773 190 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 ADCY2Q08462 1091 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 PTPRRQ15256 657 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 FAM182AQ5T1J6 154 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 CRTC1Q6UUV9 634 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 Q6ZVL8 140 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 PID1Q7Z2X4 250 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 KANSL1Q7Z3B3 1105 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 HEATR4Q86WZ0 1026 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 FSTL5Q8N475 847 aaPredicted RBP15.25■□□□□ 0.03
SMG6-220ENST00000576218 LRRC57Q8N9N7 239 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 OR56A4Q8NGH8 313 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 FUBP1Q96AE4 644 aaKnown RBP15.25■□□□□ 0.03
SMG6-220ENST00000576218 AP2M1Q96CW1 435 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 IMP4Q96G21 291 aaKnown RBP15.25■□□□□ 0.03
SMG6-220ENST00000576218 CNTNAP3BQ96NU0 1288 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 VAT1Q99536 393 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 CNTNAP3Q9BZ76 1288 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 TCEAL2Q9H3H9 227 aaPredicted RBP15.25■□□□□ 0.03
SMG6-220ENST00000576218 UBP1Q9NZI7 540 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 PKD2L2Q9NZM6 624 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 NCKIPSDQ9NZQ3 722 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 KLF15Q9UIH9 416 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 CSNK1G3Q9Y6M4 447 aa15.25■□□□□ 0.03
SMG6-220ENST00000576218 TDRD6O60522 2096 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 A0A0U1RQS6 177 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 GOLGA6L3A6NEY3 463 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 K7ESM1 405 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 MMP2P08253 660 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 C1SP09871 688 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 CCDC175P0C221 793 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 MYCLP1P12525 358 aaPredicted RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 NFKB1P19838 968 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ACADVLP49748 655 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms