RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PDP2Q9P2J9 529 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 LHX3Q9UBR4 397 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 VPS4AQ9UN37 437 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 NEU3Q9UQ49 428 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 SETD2Q9BYW2 2564 aaPredicted RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 C2CD3Q4AC94 2353 aa9□□□□□ -0.97
SMG6-218ENST00000575454 IGHV1OR21-1A0A087WYE8 117 aa9□□□□□ -0.97
SMG6-218ENST00000575454 C2CD4BA6NLJ0 364 aa9□□□□□ -0.97
SMG6-218ENST00000575454 TEX33O43247 280 aa9□□□□□ -0.97
SMG6-218ENST00000575454 DUX1O43812 170 aa9□□□□□ -0.97
SMG6-218ENST00000575454 BUB1BO60566 1050 aaPredicted RBP9□□□□□ -0.97
SMG6-218ENST00000575454 AGFG2O95081 481 aa9□□□□□ -0.97
SMG6-218ENST00000575454 PRKCGP05129 697 aa9□□□□□ -0.97
SMG6-218ENST00000575454 PNMA6AP0CW24 399 aaPredicted RBP9□□□□□ -0.97
SMG6-218ENST00000575454 KRT3P12035 628 aa9□□□□□ -0.97
SMG6-218ENST00000575454 DESP17661 470 aa9□□□□□ -0.97
SMG6-218ENST00000575454 MMP8P22894 467 aa9□□□□□ -0.97
SMG6-218ENST00000575454 GNPDA1P46926 289 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NDST2P52849 883 aa9□□□□□ -0.97
SMG6-218ENST00000575454 HDAC4P56524 1084 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NOMO3P69849 1222 aa9□□□□□ -0.97
SMG6-218ENST00000575454 MC2RQ01718 297 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NSUN2Q08J23 767 aaKnown RBP eCLIP9□□□□□ -0.97
SMG6-218ENST00000575454 RFTN1Q14699 578 aaPredicted RBP9□□□□□ -0.97
SMG6-218ENST00000575454 ACOX1Q15067 660 aa9□□□□□ -0.97
SMG6-218ENST00000575454 C15orf59Q2T9L4 293 aaPredicted RBP9□□□□□ -0.97
SMG6-218ENST00000575454 C2CD6Q53TS8 623 aa9□□□□□ -0.97
SMG6-218ENST00000575454 FHL5Q5TD97 284 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NKAIN2Q5VXU1 208 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NAA35Q5VZE5 725 aa9□□□□□ -0.97
SMG6-218ENST00000575454 ANKS6Q68DC2 871 aa9□□□□□ -0.97
SMG6-218ENST00000575454 TCTN3Q6NUS6 607 aa9□□□□□ -0.97
SMG6-218ENST00000575454 SLC30A9Q6PML9 568 aa9□□□□□ -0.97
SMG6-218ENST00000575454 WDR74Q6RFH5 385 aaPredicted RBP9□□□□□ -0.97
SMG6-218ENST00000575454 NYAP1Q6ZVC0 841 aa9□□□□□ -0.97
SMG6-218ENST00000575454 SRLQ86TD4 932 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NRROSQ86YC3 692 aa9□□□□□ -0.97
SMG6-218ENST00000575454 FAM114A1Q8IWE2 563 aa9□□□□□ -0.97
SMG6-218ENST00000575454 ESX1Q8N693 406 aa9□□□□□ -0.97
SMG6-218ENST00000575454 EFCAB3Q8N7B9 438 aa9□□□□□ -0.97
SMG6-218ENST00000575454 OR10G6Q8NH81 332 aa9□□□□□ -0.97
SMG6-218ENST00000575454 FAM172AQ8WUF8 416 aa9□□□□□ -0.97
SMG6-218ENST00000575454 STARD8Q92502 1023 aa9□□□□□ -0.97
SMG6-218ENST00000575454 PMEPA1Q969W9 287 aa9□□□□□ -0.97
SMG6-218ENST00000575454 ECHDC3Q96DC8 303 aa9□□□□□ -0.97
SMG6-218ENST00000575454 RTP4Q96DX8 246 aa9□□□□□ -0.97
SMG6-218ENST00000575454 LGR4Q9BXB1 951 aa9□□□□□ -0.97
SMG6-218ENST00000575454 TEX101Q9BY14 249 aa9□□□□□ -0.97
SMG6-218ENST00000575454 SPRY4Q9C004 299 aa9□□□□□ -0.97
SMG6-218ENST00000575454 NOL6Q9H6R4 1146 aaKnown RBP9□□□□□ -0.97
SMG6-218ENST00000575454 PRDM8Q9NQV8 689 aa9□□□□□ -0.97
SMG6-218ENST00000575454 FBXO8Q9NRD0 319 aa9□□□□□ -0.97
SMG6-218ENST00000575454 IGSF5Q9NSI5 407 aa9□□□□□ -0.97
SMG6-218ENST00000575454 OCIAD1Q9NX40 245 aa9□□□□□ -0.97
SMG6-218ENST00000575454 PLEKHB1Q9UF11 243 aaPredicted RBP9□□□□□ -0.97
SMG6-218ENST00000575454 CRYBG3Q68DQ2 2970 aa9□□□□□ -0.97
SMG6-218ENST00000575454 CELSR2Q9HCU4 2923 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 POLQO75417 2590 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 ANKRD62A6NC57 917 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 MTSS1O43312 755 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 PRAMEF11O60813 436 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 PALMO75781 387 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 CEACAM5P06731 702 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 IVLP07476 585 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 MPSTP25325 297 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 TEAD1P28347 426 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 PPM1FP49593 454 aaPredicted RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 RENBPP51606 427 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 AP1S1P61966 158 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 CTBSQ01459 385 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 RALGDSQ12967 914 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 LRP8Q14114 963 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 MAP7Q14244 749 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 MAN2A1Q16706 1144 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 TPD52L1Q16890 204 aaPredicted RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 KLHDC7AQ5VTJ3 777 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 NOP9Q86U38 636 aaKnown RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 ZSWIM9Q86XI8 627 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 CCDC185Q8N715 623 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 BMPERQ8N8U9 685 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 NETO2Q8NC67 525 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 GALNT11Q8NCW6 608 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 GPT2Q8TD30 523 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 SPOCK2Q92563 424 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 SH3KBP1Q96B97 665 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 NUS1Q96E22 293 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 SLC38A3Q99624 504 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 CINPQ9BW66 212 aaPredicted RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 STK33Q9BYT3 514 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 FRMD8Q9BZ67 464 aaPredicted RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 KLC2Q9H0B6 622 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 NDST4Q9H3R1 872 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 STN1Q9H668 368 aaKnown RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 AJAP1Q9UKB5 411 aaPredicted RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 SUFUQ9UMX1 484 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 SLC17A4Q9Y2C5 497 aa8.99□□□□□ -0.97
SMG6-218ENST00000575454 TMEM184BQ9Y519 407 aaPredicted RBP8.99□□□□□ -0.97
SMG6-218ENST00000575454 LOC101059948A0A1B0GTJ6 334 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms