RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 POPDC3Q9HBV1 291 aa8.96□□□□□ -0.98
NCBP3-204ENST00000574911 LZTS1Q9Y250 596 aa8.96□□□□□ -0.98
NCBP3-204ENST00000574911 CRYL1Q9Y2S2 319 aa8.96□□□□□ -0.98
NCBP3-204ENST00000574911 CCDC162PA2VCL2 907 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 CD3EAPO15446 510 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RAMP2O60895 175 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 GJB3O75712 270 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SRP72O76094 671 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 GLP2RO95838 553 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 TBX18O95935 607 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 FGF4P08620 206 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ALDOCP09972 364 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 HOXB8P17481 243 aaPredicted RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SLC7A1P30825 629 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 MAGEA11P43364 429 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RPL5P46777 297 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RALGDSQ12967 914 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 LSAMPQ13449 338 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 LAMB3Q13751 1172 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SEMA3AQ14563 771 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SAMD4BQ5PRF9 694 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 C6orf10Q5SRN2 563 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 IRAK1BP1Q5VVH5 260 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 MFSD14CQ5VZR4 134 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RTN4RL1Q86UN2 441 aaPredicted RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ZNF354CQ86Y25 554 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 IFNL1Q8IU54 200 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 COLGALT2Q8IYK4 626 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 GALNT4Q8N4A0 578 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SNX31Q8N9S9 440 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 OR9I1Q8NGQ6 314 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RIN3Q8TB24 985 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 TRIB2Q92519 343 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ASB2Q96Q27 587 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 AKTIPQ9H8T0 292 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 FBRSL1Q9HCM7 1045 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 VCX3AQ9NNX9 186 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 MIA3Q5JRA6 1907 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 MUSKO15146 869 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 PRAMEF11O60813 436 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RPP40O75818 363 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 OR6B1O95007 311 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 TNFAIP8O95379 198 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 PGM3O95394 542 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 EPOP01588 193 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 IGLV3-27P01718 113 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SLC4A1P02730 911 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 FGF1P05230 155 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 FAM58BPP0C7Q3 252 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 HLA-DPA1P20036 260 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ETFBP38117 255 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SH3BP2P78314 561 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 DYNC1I2Q13409 638 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 BTG3Q14201 252 aaPredicted RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 PTPRCAPQ14761 206 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 OR4D1Q15615 310 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 KCNA10Q16322 511 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 EP400NLQ6ZTU2 488 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 PTGR2Q8N8N7 351 aaPredicted RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 KLHDC9Q8NEP7 349 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 OR52K2Q8NGK3 314 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 LRTOMTQ8WZ04 291 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ROPN1LQ96C74 230 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 DNAJC1Q96KC8 554 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ZNF597Q96LX8 424 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SEMA3CQ99985 751 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 GPATCH1Q9BRR8 931 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 POLR1EQ9GZS1 481 aaKnown RBP8.95□□□□□ -0.98
NCBP3-204ENST00000574911 COQ10BQ9H8M1 238 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 RIMKLBQ9ULI2 386 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 PCDHB5Q9Y5E4 795 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 ARL5AQ9Y689 179 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 SQORQ9Y6N5 450 aa8.95□□□□□ -0.98
NCBP3-204ENST00000574911 C7orf72A4D263 438 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 BBIP1A8MTZ0 92 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 SEPT4O43236 478 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 TRPA1O75762 1119 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 CDK14O94921 469 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 CLPTM1O96005 669 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 MT-CO1P00395 513 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 ETS2P15036 469 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 OGNP20774 298 aaKnown RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 ACVRL1P37023 503 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 ZNF157P51786 506 aaPredicted RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 CDH13P55290 713 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 YBEYP58557 167 aaPredicted RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 APOFQ13790 326 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 RBBP5Q15291 538 aaKnown RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 CLLU1OSQ5K130 101 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 VARS2Q5ST30 1063 aaKnown RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 CCSAPQ6IQ19 270 aaPredicted RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 MRNIPQ6NTE8 343 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 GLB1LQ6UWU2 654 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 CIR1Q86X95 450 aaPredicted RBP8.94□□□□□ -0.98
NCBP3-204ENST00000574911 PHYKPLQ8IUZ5 450 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 METTL25Q8N6Q8 603 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 RHEBL1Q8TAI7 183 aa8.94□□□□□ -0.98
NCBP3-204ENST00000574911 BRSK1Q8TDC3 778 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms