RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CIDEBQ9UHD4 219 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 TTC24A2A3L6 582 aaPredicted RBP19.09■□□□□ 0.65
SCARF1-206ENST00000573852 LRRC14BA6NHZ5 514 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 HAS3O00219 553 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 PEX11BO96011 259 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 CAPN3P20807 821 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 CCR1P32246 355 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 LPIN1Q14693 890 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 FAM171BQ6P995 826 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 HDAC10Q969S8 669 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 SLC10A4Q96EP9 437 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 SGIP1Q9BQI5 828 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 NOL6Q9H6R4 1146 aaKnown RBP19.09■□□□□ 0.65
SCARF1-206ENST00000573852 NT5MQ9NPB1 228 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 DSEQ9UL01 958 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 E9PAM4 449 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 PFDN1O60925 122 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 CD86P42081 329 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 SCNN1GP51170 649 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 HERVK_113P63132 956 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 CAPRIN1Q14444 709 aaKnown RBP19.08■□□□□ 0.65
SCARF1-206ENST00000573852 GRB7Q14451 532 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 TLK2Q86UE8 772 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 LRRTM3Q86VH5 581 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 SLC15A3Q8IY34 581 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 CLYBLQ8N0X4 340 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 RTL3Q8N8U3 475 aaKnown RBP19.08■□□□□ 0.65
SCARF1-206ENST00000573852 ERVK-6Q9BXR3 956 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 POLR3BQ9NW08 1133 aaPredicted RBP19.08■□□□□ 0.65
SCARF1-206ENST00000573852 ABCD2Q9UBJ2 740 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 CRYL1Q9Y2S2 319 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 TTC3P53804 2025 aa19.08■□□□□ 0.65
SCARF1-206ENST00000573852 CDK14O94921 469 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 SIX3O95343 332 aaPredicted RBP19.08■□□□□ 0.64
SCARF1-206ENST00000573852 FOXA1P55317 472 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 ITKQ08881 620 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 IMP4Q96G21 291 aaKnown RBP19.08■□□□□ 0.64
SCARF1-206ENST00000573852 FAM105AQ9NUU6 356 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 KCTD3Q9Y597 815 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 HS3ST4Q9Y661 456 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 DHRS12A0PJE2 317 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 ARL5CA6NH57 179 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 TPST1O60507 370 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 SLC4A1P02730 911 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 MYL3P08590 195 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 CHRM3P20309 590 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 BEX3Q00994 111 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 LDLRAD1Q5T700 205 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 SCML4Q8N228 414 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 ZNF786Q8N393 782 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 MFSD2AQ8NA29 543 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 SLC45A3Q96JT2 553 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 KLHL5Q96PQ7 755 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 OSER1Q9NX31 292 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 RHBDL2Q9NX52 303 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 CMTM6Q9NX76 183 aa19.08■□□□□ 0.64
SCARF1-206ENST00000573852 BBIP1A8MTZ0 92 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 J3KR12 359 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 FXYD1O00168 92 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 PIP5K1BO14986 540 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 CTBSQ01459 385 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 RYBPQ8N488 228 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-206ENST00000573852 HOPXQ9BPY8 73 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-206ENST00000573852 TRIM8Q9BZR9 551 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 AGPAT4Q9NRZ5 378 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 EBF1Q9UH73 591 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 SLC7A4O43246 635 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 MMP2P08253 660 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 HTR7P34969 479 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 BRCC3P46736 316 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 STT3AP46977 705 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 ATP6V0D1P61421 351 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 DSC2Q02487 901 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 SLC10A7Q0GE19 358 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 UPP1Q16831 310 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 INTS11Q5TA45 600 aaKnown RBP19.07■□□□□ 0.64
SCARF1-206ENST00000573852 CAMK1DQ8IU85 385 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 PTGR2Q8N8N7 351 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-206ENST00000573852 KCNA7Q96RP8 456 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 SMOC2Q9H3U7 446 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 ABCC13Q9NSE7 274 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 NDUFAF1Q9Y375 327 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 GMEB1Q9Y692 573 aa19.07■□□□□ 0.64
SCARF1-206ENST00000573852 C17orf102A2RUQ5 167 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 TRIM64CA6NLI5 447 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 AQP12BA6NM10 295 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 PAPSS2O95340 614 aaPredicted RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MYF6P23409 242 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 OXTRP30559 389 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 NFKB2Q00653 900 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 TIAL1Q01085 375 aaKnown RBP eCLIP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 KCTD21Q4G0X4 260 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 TTC33Q6PID6 262 aaPredicted RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 BEND5Q7L4P6 421 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 GALNT7Q86SF2 657 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 SCD5Q86SK9 330 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 CLVS1Q8IUQ0 354 aaPredicted RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 PHYKPLQ8IUZ5 450 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 AQP12AQ8IXF9 295 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MINDY1Q8N5J2 469 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms