RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CXorf40AQ8TE69 158 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 TEKT4Q8WW24 435 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 SREK1Q8WXA9 508 aaKnown RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 GATA6Q92908 595 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CENPTQ96BT3 561 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CNDP2Q96KP4 475 aaKnown RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 ZNF641Q96N77 438 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 TUBGCP5Q96RT8 1024 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 KLF6Q99612 283 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CINPQ9BW66 212 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUP88-205ENST00000572809 ETNK2Q9NVF9 386 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CTTNBP2NLQ9P2B4 639 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 ITM2BQ9Y287 266 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 TRPM6Q9BX84 2022 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ACACBO00763 2458 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 SPTY2D1-AS1A0A0U1RR47 76 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 TMEM8BA6NDV4 472 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 NEMP2A6NFY4 417 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 FAM229AH3BQW9 127 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 AKR1B10O60218 316 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 MAFKO60675 156 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 TPM1P09493 284 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 CDK4P11802 303 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 DGKAP23743 735 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 IL4RP24394 825 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 SERPINA4P29622 427 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 RGRP47804 291 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 SCNN1BP51168 640 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 RENBPP51606 427 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ADKP55263 362 aaKnown RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 CDH6P55285 790 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 HNRNPKP61978 463 aaKnown RBP eCLIP7.49□□□□□ -1.21
NUP88-205ENST00000572809 POLR2LP62875 67 aaKnown RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 SLC25A11Q02978 314 aaKnown RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 BCL2L1Q07817 233 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 SLC10A7Q0GE19 358 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ELP6Q0PNE2 266 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 DNAJC3Q13217 504 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 KRT81Q14533 505 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 ATP13A4Q4VNC1 1196 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ZNF542PQ5EBM4 170 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 CFAP58Q5T655 872 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ERAP2Q6P179 960 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 BRAT1Q6PJG6 821 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 TMCO3Q6UWJ1 677 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 KYAT3Q6YP21 454 aaKnown RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 PTAR1Q7Z6K3 402 aaPredicted RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 CAMK1DQ8IU85 385 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 TP53INP2Q8IXH6 220 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 SLC22A18ASQ8N1D0 253 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 GALNT15Q8N3T1 639 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 NPWQ8N729 165 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 KCTD6Q8NC69 237 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 DENND6BQ8NEG7 585 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ZNF564Q8TBZ8 553 aaPredicted RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 CTNNBL1Q8WYA6 563 aaPredicted RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 ZNF599Q96NL3 588 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 CSPG4P5Q96PW8 444 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 CHP1Q99653 195 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 WRAP53Q9BUR4 548 aaKnown RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 C1QTNF7Q9BXJ2 289 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 RBSNQ9H1K0 784 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 DEF6Q9H4E7 631 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 ATP13A3Q9H7F0 1226 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 PCDH18Q9HCL0 1135 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 DNAJC28Q9NX36 388 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 UVRAGQ9P2Y5 699 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 NENFQ9UMX5 172 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 PCDHGA1Q9Y5H4 931 aa7.49□□□□□ -1.21
NUP88-205ENST00000572809 TPRP12270 2363 aaKnown RBP7.49□□□□□ -1.21
NUP88-205ENST00000572809 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.48□□□□□ -1.21
NUP88-205ENST00000572809 TSPAN11A1L157 253 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 CFAP69A5D8W1 941 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 TRIM38O00635 465 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 TOR1BO14657 336 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 MUSKO15146 869 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 SIGLEC6O43699 453 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PIAS2O75928 621 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 KRT37O76014 449 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PROSCO94903 275 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 CSF2P04141 144 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 ALPPL2P10696 532 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 JUPP14923 745 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 CKMT2P17540 419 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 SERPINB6P35237 376 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 THOP1P52888 689 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PFN3P60673 137 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 YPEL5P62699 121 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PDE1CQ14123 709 aaPredicted RBP7.48□□□□□ -1.21
NUP88-205ENST00000572809 PTK2BQ14289 1009 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms