RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, human

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-205	ENST00000572621	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	MYH9	P35579	1960 aa	Known RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	DDTL	A6NHG4	134 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	GTPBP1	O00178	669 aa	Known RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	PRODH	O43272	600 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	RBMXL2	O75526	392 aa	Known RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	METTL18	O95568	372 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	PDHA2	P29803	388 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	UGT1A5	P35504	534 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	CCNH	P51946	323 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	ABR	Q12979	859 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	ITPK1	Q13572	414 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	RAP1GAP2	Q684P5	730 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	EMID1	Q96A84	441 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	LINGO1	Q96FE5	620 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	POLR3H	Q9Y535	204 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	ABCA8	O94911	1581 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	UMODL1	Q5DID0	1318 aa		13.82	□□□□□ -0.2
PRPF8-205	ENST00000572621	WFS1	O76024	890 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	MT-ND1	P03886	318 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	IFNA6	P05013	189 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	PACS1	Q6VY07	963 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ADAMTSL2	Q86TH1	951 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ZNF248	Q8NDW4	579 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	OR4A15	Q8NGL6	344 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	C1QTNF7	Q9BXJ2	289 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ZNF304	Q9HCX3	659 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	PAPSS1	O43252	624 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	PTPN1	P18031	435 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	CXCR2	P25025	360 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	PNPT1	Q8TCS8	783 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	NAT14	Q8WUY8	206 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	GPN1	Q9HCN4	374 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ACSS2	Q9NR19	701 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	BAIAP2	Q9UQB8	552 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	MANF	P55145	182 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ALG11	Q2TAA5	492 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	CXorf57	Q6NSI4	855 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	AGBL3	Q8NEM8	1001 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	CLHC1	Q8NHS4	586 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	SUN5	Q8TC36	379 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	EZH1	Q92800	747 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	RGS10	O43665	173 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	GJA8	P48165	433 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	GTF2A2	P52657	109 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	MYBPC3	Q14896	1274 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	NETO2	Q8NC67	525 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	EXOC2	Q96KP1	924 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	HOPX	Q9BPY8	73 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	AGXT2	Q9BYV1	514 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	MED28	Q9H204	178 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	BCKDK	O14874	412 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	EPHB6	O15197	1021 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	KRT33A	O76009	404 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	RPS12	P25398	132 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	RAB2A	P61019	212 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	SIM2	Q14190	667 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	DLG2	Q15700	870 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	OR2T12	Q8NG77	320 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	LNX1	Q8TBB1	728 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	RDH11	Q8TC12	318 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	LRRC4C	Q9HCJ2	640 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	FBXO5	Q9UKT4	447 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ATP5C1	P36542	298 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	AMPD2	Q01433	879 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	NOL9	Q5SY16	702 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	TNFAIP8L1	Q8WVP5	186 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	TOR3A	Q9H497	397 aa		13.81	□□□□□ -0.2
PRPF8-205	ENST00000572621	ABLIM1	O14639	778 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	CTSE	P14091	401 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	AZGP1	P25311	298 aa	Known RBP	13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	CBX5	P45973	191 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	AFTPH	Q6ULP2	937 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	MAP4K3	Q8IVH8	894 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	GPR65	Q8IYL9	337 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	LMAN2L	Q9H0V9	348 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	SAGE2P	A6NJ88	616 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	IGFBP5	P24593	272 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	TNFAIP8L3	Q5GJ75	292 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	WSCD1	Q658N2	575 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	ADCY4	Q8NFM4	1077 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	MAGEL2	Q9UJ55	1249 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	TULP4	Q9NRJ4	1543 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	CABYR	O75952	493 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	SP100	P23497	879 aa	Predicted RBP	13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	SREBF2	Q12772	1141 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	LIN52	Q52LA3	116 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	MIIP	Q5JXC2	388 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	UBE2J2	Q8N2K1	259 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	FAM98A	Q8NCA5	519 aa	Known RBP	13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	TP53INP1	Q96A56	240 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	SIPA1	Q96FS4	1042 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	GAD1	Q99259	594 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	CDC40	O60508	579 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	4e-6	■■□□□ 11.4
PRPF8-205	ENST00000572621	UGT2B11	O75310	529 aa		13.8	□□□□□ -0.2
PRPF8-205	ENST00000572621	MPST	P25325	297 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms