RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MYCLP1P12525 358 aaPredicted RBP19.87■□□□□ 0.77
CCDC40-206ENST00000572083 CHRNB2P17787 502 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 GPD1P21695 349 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 CSTF2P33240 577 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC40-206ENST00000572083 GNPDA1P46926 289 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 TRA2AQ13595 282 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC40-206ENST00000572083 CLPPQ16740 277 aaPredicted RBP19.87■□□□□ 0.77
CCDC40-206ENST00000572083 DPPA4Q7L190 304 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 ZNF677Q86XU0 584 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 OR4D9Q8NGE8 314 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 PTCD2Q8WV60 388 aaKnown RBP19.87■□□□□ 0.77
CCDC40-206ENST00000572083 CATSPER2Q96P56 530 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 STK33Q9BYT3 514 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 OCIAD1Q9NX40 245 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 SLC39A1Q9NY26 324 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 ST14Q9Y5Y6 855 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 USP9XQ93008 2570 aaPredicted RBP19.86■□□□□ 0.77
CCDC40-206ENST00000572083 EFCAB7A8K855 629 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 WASH4PA8MWX3 477 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 PPM1DO15297 605 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 ZW10O43264 779 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 CCP110O43303 1012 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 PRAMEF11O60813 436 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 THRAP10827 490 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 CDR2Q01850 454 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 BCL2L1Q07817 233 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 PTP4A2Q12974 167 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 NCAPHQ15003 741 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 AFMIDQ63HM1 303 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 ANKS6Q68DC2 871 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 WDR59Q6PJI9 974 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 HEATR4Q86WZ0 1026 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 FAM114A1Q8IWE2 563 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 NRSN1Q8IZ57 195 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 NAGSQ8N159 534 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 ECHDC3Q96DC8 303 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 NUS1Q96E22 293 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 SELENOOQ9BVL4 669 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 LRRC19Q9H756 370 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 FZD10Q9ULW2 581 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 SUFUQ9UMX1 484 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 PLAAQ9Y263 795 aa19.86■□□□□ 0.77
CCDC40-206ENST00000572083 IGHV1OR21-1A0A087WYE8 117 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 PDE2AO00408 941 aaPredicted RBP19.85■□□□□ 0.77
CCDC40-206ENST00000572083 PALMO75781 387 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 CEACAM5P06731 702 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 GPR3P46089 330 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 DCAF12Q5T6F0 453 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 FAM26EQ8N5C1 309 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 SLC45A3Q96JT2 553 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 ASPSCR1Q9BZE9 553 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 GPN2Q9H9Y4 310 aaPredicted RBP19.85■□□□□ 0.77
CCDC40-206ENST00000572083 PHPT1Q9NRX4 125 aaPredicted RBP19.85■□□□□ 0.77
CCDC40-206ENST00000572083 B4GALT6Q9UBX8 382 aa19.85■□□□□ 0.77
CCDC40-206ENST00000572083 FGF10O15520 208 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-206ENST00000572083 CSNK1DP48730 415 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 TPI1P60174 286 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 CTBSQ01459 385 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 CDC20Q12834 499 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 DENND2CQ68D51 928 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 UNC5BQ8IZJ1 945 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 COQ10AQ96MF6 247 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 NSMCE3Q96MG7 304 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 PSMG3-AS1Q96PY0 264 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 CINPQ9BW66 212 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-206ENST00000572083 FRMD8Q9BZ67 464 aaPredicted RBP19.84■□□□□ 0.77
CCDC40-206ENST00000572083 SLC39A8Q9C0K1 460 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 TRNAU1APQ9NX07 287 aaKnown RBP19.84■□□□□ 0.77
CCDC40-206ENST00000572083 KCNK4Q9NYG8 393 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 ADAM22Q9P0K1 906 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 PILRAQ9UKJ1 303 aa19.84■□□□□ 0.77
CCDC40-206ENST00000572083 SPTAN1Q13813 2472 aaKnown RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 LOC101059948A0A1B0GTJ6 334 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 BLACEA4D250 179 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 TRAFD1O14545 582 aaPredicted RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 OAS2P29728 719 aaKnown RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 NSFP46459 744 aaKnown RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 POLD2P49005 469 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 PPM1FP49593 454 aaPredicted RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 PAPOLAP51003 745 aaKnown RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 POLR2LP62875 67 aaKnown RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 CNGA3Q16281 694 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 C4orf17Q53FE4 359 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 ZNF761Q86XN6 746 aaPredicted RBP19.83■□□□□ 0.77
CCDC40-206ENST00000572083 C3orf20Q8ND61 904 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 ABHD17AQ96GS6 310 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 PCDHB18PQ96TA0 734 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 CTRCQ99895 268 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 TEX101Q9BY14 249 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 GANQ9H2C0 597 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 GPATCH2LQ9NWQ4 482 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 PLEKHM1Q9Y4G2 1056 aa19.83■□□□□ 0.77
CCDC40-206ENST00000572083 GOLGA6CA6NDK9 693 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 GOLGA6BA6NDN3 693 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 B4E171 279 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 CAPN5O15484 640 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-206ENST00000572083 GOLGA6DP0CG33 693 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 UNGP13051 313 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-206ENST00000572083 TSPAN7P41732 249 aa19.82■□□□□ 0.76
CCDC40-206ENST00000572083 NDST2P52849 883 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms