RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 DTD2Q96FN9 168 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 OXNAD1Q96HP4 312 aaPredicted RBP16.19■□□□□ 0.18
LITAF-210ENST00000571976 SMIM14Q96QK8 99 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 SRPK1Q96SB4 655 aaKnown RBP16.19■□□□□ 0.18
LITAF-210ENST00000571976 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 ZKSCAN5Q9Y2L8 839 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 AAR2Q9Y312 384 aaKnown RBP16.19■□□□□ 0.18
LITAF-210ENST00000571976 LRRK1Q38SD2 2015 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 SPTBN4Q9H254 2564 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 SPTY2D1-AS1A0A0U1RR47 76 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 GOLGA8CPA6NN73 597 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 PCDHGA12O60330 932 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 GCATO75600 419 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 FGGP02679 453 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 PCCBP05166 539 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 STC1P52823 247 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 THOP1P52888 689 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 GEMP55040 296 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 PDE1CQ14123 709 aaPredicted RBP16.18■□□□□ 0.18
LITAF-210ENST00000571976 CCNG2Q16589 344 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 DBX2Q6ZNG2 339 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 Q6ZVL8 140 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 PIP4P1Q86T03 277 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 C1orf54Q8WWF1 131 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 NUS1Q96E22 293 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 PBKQ96KB5 322 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 TMEM121Q9BTD3 319 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 MAGEE1Q9HCI5 957 aa16.18■□□□□ 0.18
LITAF-210ENST00000571976 A0A0U1RQS6 177 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 C1orf232A0A0U1RR37 186 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 DCDC2BA2VCK2 349 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 USP27XA6NNY8 438 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 F5H423 210 aaPredicted RBP16.17■□□□□ 0.18
LITAF-210ENST00000571976 CLDN7O95471 211 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 CSRP1P21291 193 aaKnown RBP16.17■□□□□ 0.18
LITAF-210ENST00000571976 ETV3P41162 512 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 FZD2Q14332 565 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 SHBQ15464 509 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 SIX1Q15475 284 aaPredicted RBP16.17■□□□□ 0.18
LITAF-210ENST00000571976 OASLQ15646 514 aaKnown RBP16.17■□□□□ 0.18
LITAF-210ENST00000571976 CDKN3Q16667 212 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 LONRF2Q1L5Z9 754 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 PARP6Q2NL67 630 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 ESRP1Q6NXG1 681 aaKnown RBP16.17■□□□□ 0.18
LITAF-210ENST00000571976 PNCKQ6P2M8 343 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 KDM7AQ6ZMT4 941 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 TECPR1Q7Z6L1 1165 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 PARGQ86W56 976 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 PLA2G15Q8NCC3 412 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 IPMKQ8NFU5 416 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 CCHCR1Q8TD31 782 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 MRGPRX2Q96LB1 330 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 APOOQ9BUR5 198 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 FSD1LQ9BXM9 530 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 SLC32A1Q9H598 525 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 ZNF148Q9UQR1 794 aa16.17■□□□□ 0.18
LITAF-210ENST00000571976 TMEM131Q92545 1883 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 DNAH14Q0VDD8 3507 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 FLRT2O43155 660 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 ATP1A1P05023 1023 aaKnown RBP16.16■□□□□ 0.18
LITAF-210ENST00000571976 ITGAVP06756 1048 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 HOXC4P09017 264 aaPredicted RBP16.16■□□□□ 0.18
LITAF-210ENST00000571976 C1SP09871 688 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 TSHRP16473 764 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 HLA-DPA1P20036 260 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 PSMB4P28070 264 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 HTR1BP28222 390 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 EPHA8P29322 1005 aaPredicted RBP16.16■□□□□ 0.18
LITAF-210ENST00000571976 TRIM23P36406 574 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 GDF10P55107 478 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 IL9RQ01113 521 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 DPTQ07507 201 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 MACC1Q6ZN28 852 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 ARHGEF18Q6ZSZ5 1173 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 ZNF765Q7L2R6 523 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 NLRP8Q86W28 1048 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 NAXDQ8IW45 347 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 NRSN1Q8IZ57 195 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 SAP25Q8TEE9 199 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 RTP4Q96DX8 246 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 GORASP1Q9BQQ3 440 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 ZFYVE1Q9HBF4 777 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 HOMER3Q9NSC5 361 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 OR1A2Q9Y585 309 aa16.16■□□□□ 0.18
LITAF-210ENST00000571976 ASCC3Q8N3C0 2202 aaKnown RBP16.16■□□□□ 0.18
LITAF-210ENST00000571976 TP53BP1Q12888 1972 aaPredicted RBP16.16■□□□□ 0.18
LITAF-210ENST00000571976 DCHS1Q96JQ0 3298 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 RGSL1A5PLK6 1076 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 GOLGA6CA6NDK9 693 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 GOLGA6BA6NDN3 693 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 CACNB4O00305 520 aaPredicted RBP16.15■□□□□ 0.18
LITAF-210ENST00000571976 SH3BP5O60239 455 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 CSF2P04141 144 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 ATXN1LP0C7T5 689 aaKnown RBP16.15■□□□□ 0.18
LITAF-210ENST00000571976 GOLGA6DP0CG33 693 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 TEAD1P28347 426 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 GRK6P43250 576 aa16.15■□□□□ 0.18
LITAF-210ENST00000571976 HNRNPKP61978 463 aaKnown RBP eCLIP16.15■□□□□ 0.186e-8■□□□□ 11.1
LITAF-210ENST00000571976 BNIP3Q12983 259 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms