RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 CD86P42081 329 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 NR2C2P49116 596 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 PEX5P50542 639 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 COPS2P61201 443 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 IFI35P80217 286 aaPredicted RBP14.57□□□□□ -0.08
LITAF-208ENST00000571627 PPARDQ03181 441 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 ADCY2Q08462 1091 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 PDK1Q15118 436 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 SMAD1Q15797 465 aaKnown RBP14.57□□□□□ -0.08
LITAF-208ENST00000571627 TFDP3Q5H9I0 405 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 ENPP7Q6UWV6 458 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 SPOCD1Q6ZMY3 1216 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 RFLNAQ6ZTI6 216 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 USP45Q70EL2 814 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 RD3Q7Z3Z2 195 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 HID1Q8IV36 788 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 RNF10Q8N5U6 811 aaKnown RBP14.57□□□□□ -0.08
LITAF-208ENST00000571627 LRRC57Q8N9N7 239 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 UBE2Q2Q8WVN8 375 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 FUBP1Q96AE4 644 aaKnown RBP14.57□□□□□ -0.08
LITAF-208ENST00000571627 SCRN2Q96FV2 425 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 MCCC1Q96RQ3 725 aaPredicted RBP14.57□□□□□ -0.08
LITAF-208ENST00000571627 IL12RB2Q99665 862 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 TDRD1Q9BXT4 1180 aaKnown RBP14.57□□□□□ -0.08
LITAF-208ENST00000571627 SLC13A1Q9BZW2 595 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 CLPBQ9H078 707 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 SPASTQ9UBP0 616 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 KLQ9UEF7 1012 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 PCDHGA1Q9Y5H4 931 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 U3KQA8 63 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 KNTC1P50748 2209 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 ASXL3Q9C0F0 2248 aa14.57□□□□□ -0.08
LITAF-208ENST00000571627 GRID2IPA4D2P6 1211 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 PPP1R12AO14974 1030 aaPredicted RBP14.56□□□□□ -0.08
LITAF-208ENST00000571627 KRT86O43790 486 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 CST8O60676 142 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 PRLP01236 227 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 MMP2P08253 660 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 TSHRP16473 764 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 TGM2P21980 687 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 CES1P23141 567 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 ACP1P24666 158 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 CTNNA2P26232 953 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 HTR1BP28222 390 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 HNF1BP35680 557 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 CETN2P41208 172 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 EPHB1P54762 984 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 ARHGEF7Q14155 803 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 PPP2R5EQ16537 467 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 LRRC66Q68CR7 880 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 ESRP1Q6NXG1 681 aaKnown RBP14.56□□□□□ -0.08
LITAF-208ENST00000571627 Q6ZVL8 140 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 PEX26Q7Z412 305 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 CCDC50Q8IVM0 306 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 GALNT15Q8N3T1 639 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 LPCAT1Q8NF37 534 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 BTN2A2Q8WVV5 523 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 ANP32BQ92688 251 aaKnown RBP14.56□□□□□ -0.08
LITAF-208ENST00000571627 HAUS1Q96CS2 278 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 DTD2Q96FN9 168 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 PDXPQ96GD0 296 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 WDR92Q96MX6 357 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 AGAP3Q96P47 875 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 LGR4Q9BXB1 951 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 AMFRQ9UKV5 643 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 PPIL1Q9Y3C6 166 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 CSNK1G3Q9Y6M4 447 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 ANKRD11Q6UB99 2663 aaPredicted RBP14.56□□□□□ -0.08
LITAF-208ENST00000571627 RP1P56715 2156 aa14.56□□□□□ -0.08
LITAF-208ENST00000571627 hCG_1818297A0A087WSY0 165 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 A0A0J9YYE9 177 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 A0A0U1RQJ8 604 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 GOLGA6CA6NDK9 693 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 GOLGA6BA6NDN3 693 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 TMEM202A6NGA9 273 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 MIF4GDA9UHW6 222 aaKnown RBP14.55□□□□□ -0.08
LITAF-208ENST00000571627 TRBC1P01850 177 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 C1SP09871 688 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 GOLGA6DP0CG33 693 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 CKMT1AP12532 417 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 NFKBIAP25963 317 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 HK3P52790 923 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 RWDD2BP57060 319 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 SRP54P61011 504 aaKnown RBP14.55□□□□□ -0.08
LITAF-208ENST00000571627 SKOR1P84550 965 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 HES3Q5TGS1 186 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 ZCCHC8Q6NZY4 707 aaKnown RBP14.55□□□□□ -0.08
LITAF-208ENST00000571627 PNCKQ6P2M8 343 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 CRTC1Q6UUV9 634 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 NT5DC3Q86UY8 548 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 UBL4BQ8N7F7 174 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 ZCCHC14Q8WYQ9 949 aaKnown RBP14.55□□□□□ -0.08
LITAF-208ENST00000571627 OR1E3Q8WZA6 343 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 RBM15Q96T37 977 aaKnown RBP eCLIP14.55□□□□□ -0.08
LITAF-208ENST00000571627 DUSP23Q9BVJ7 150 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 WDR26Q9H7D7 661 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 PCDH9Q9HC56 1237 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 FGF22Q9HCT0 170 aa14.55□□□□□ -0.08
LITAF-208ENST00000571627 MRPL40Q9NQ50 206 aaKnown RBP14.55□□□□□ -0.08
LITAF-208ENST00000571627 GOLGA6AQ9NYA3 693 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms