RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CLSTN2Q9H4D0 955 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 FBXO8Q9NRD0 319 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ABCC13Q9NSE7 274 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 DDX56Q9NY93 547 aaKnown RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 KLQ9UEF7 1012 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 IL36AQ9UHA7 158 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 ITM2BQ9Y287 266 aa6.95□□□□□ -1.3
CHD3-213ENST00000571249 KMT2CQ8NEZ4 4911 aaKnown RBP6.95□□□□□ -1.3
CHD3-213ENST00000571249 GOLGA6L4A6NEF3 574 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 CCL21O00585 134 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 POLR1CO15160 346 aaPredicted RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 SLC26A4O43511 780 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 AP1G1O43747 822 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 VNN1O95497 513 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 SRCP12931 536 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 EDN3P14138 238 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 HTR1BP28222 390 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 CA5AP35218 305 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 ASPAP45381 313 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 CASP4P49662 377 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 ALCAMQ13740 583 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 UGT8Q16880 541 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 MEI1Q5TIA1 1274 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 RAP1GAP2Q684P5 730 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 HIST2H2BDQ6DRA6 164 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 SPOPLQ6IQ16 392 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 TMEM71Q6P5X7 295 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 FOXR2Q6PJQ5 311 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 MEX3BQ6ZN04 569 aaKnown RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 CCAR2Q8N163 923 aaKnown RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 ATP11CQ8NB49 1132 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 CT55Q8WUE5 264 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 THAP4Q8WY91 577 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 ALG14Q96F25 216 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 SPON2Q9BUD6 331 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 PANK2Q9BZ23 570 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 NUP62CLQ9H1M0 184 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 TNKS2Q9H2K2 1166 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 LRRC4Q9HBW1 653 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 ZBTB20Q9HC78 741 aaPredicted RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 XPO7Q9UIA9 1087 aaKnown RBP6.94□□□□□ -1.3
CHD3-213ENST00000571249 PCDHGA6Q9Y5G7 932 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 CSAG2Q9Y5P2 127 aa6.94□□□□□ -1.3
CHD3-213ENST00000571249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHD3-213ENST00000571249 TRGV8A0A0C4DH27 118 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 SERTM1A2A2V5 107 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 TMEM110-MUSTN1A8MSY1 372 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 TULP2O00295 520 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 EIF3DO15371 548 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD3-213ENST00000571249 SMAD6O43541 496 aaKnown RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 MMP20O60882 483 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ENDOD1O94919 500 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 CD58P19256 250 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 TACR2P21452 398 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 BMP6P22004 513 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 RRM1P23921 792 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 CMA1P23946 247 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 L1CAMP32004 1257 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 PBX1P40424 430 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 PEX5P50542 639 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 CYP2J2P51589 502 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ADORA2A-AS1P86434 159 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 INCA1Q0VD86 236 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ADIGQ0VDE8 80 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 BIRC2Q13490 618 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 SQSTM1Q13501 440 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 NFATC4Q14934 902 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 NR1D2Q14995 579 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 SGSM1Q2NKQ1 1148 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 FAM69BQ5VUD6 431 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ANKRD40Q6AI12 368 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 CXorf57Q6NSI4 855 aaKnown RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 MSANTD2Q6P1R3 559 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 FAM199XQ6PEV8 388 aaPredicted RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 DPY19L3Q6ZPD9 716 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 VASH1Q7L8A9 365 aaPredicted RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 ARHGAP22Q7Z5H3 698 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 TMEM200AQ86VY9 491 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 CHSY1Q86X52 802 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 IRF2BP1Q8IU81 584 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ELOA2Q8IYF1 753 aaPredicted RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 TP53I13Q8NBR0 393 aaPredicted RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 ACBD4Q8NC06 268 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 OR52K2Q8NGK3 314 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 PLEKHO2Q8TD55 490 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 FAR1Q8WVX9 515 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 PATE1Q8WXA2 126 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 TAF4BQ92750 862 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 DNAJC19Q96DA6 116 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 PDXPQ96GD0 296 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ELMO2Q96JJ3 720 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 DPYSL5Q9BPU6 564 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 FEM1AQ9BSK4 669 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 ENKD1Q9H0I2 346 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 OLFML3Q9NRN5 406 aa6.93□□□□□ -1.3
CHD3-213ENST00000571249 SPATS2LQ9NUQ6 558 aaKnown RBP6.93□□□□□ -1.3
CHD3-213ENST00000571249 NDFIP2Q9NV92 336 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms