RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 NSMCE3Q96MG7 304 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 TMEM120AQ9BXJ8 343 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 PLA2G2FQ9BZM2 168 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 LINC00597Q9H2U6 94 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 FBXO6Q9NRD1 293 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-208ENST00000571043 LHX3Q9UBR4 397 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 VPS51Q9UID3 782 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 RAI2Q9Y5P3 530 aa17.37■□□□□ 0.37
RPAIN-208ENST00000571043 CXorf51AA0A1B0GTR3 108 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 CFAP73A6NFT4 308 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 C2CD4DB7Z1M9 353 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 G3V2L1 256 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 H0YHG0 523 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 PHGDHO43175 533 aaKnown RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 ATP5BP06576 529 aaKnown RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 SAT1P21673 171 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 GMPRP36959 345 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 SLC1A6P48664 564 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 TAS2R39P59534 338 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 TAF1AQ15573 450 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 CNSTQ6PJW8 725 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 ZCCHC23Q6ZST2 131 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 PTAR1Q7Z6K3 402 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 GPATCH11Q8N954 259 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 ST13P5Q8NFI4 369 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 DDI1Q8WTU0 396 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 OSCP1Q8WVF1 389 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 SCG3Q8WXD2 468 aaKnown RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 DNAJC1Q96KC8 554 aaKnown RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 TBATAQ96M53 351 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 OMDQ99983 421 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 RPP25Q9BUL9 199 aaKnown RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 C2orf49Q9BVC5 232 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 ADGRE3Q9BY15 652 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 ECT2Q9H8V3 914 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 TXLNGQ9NUQ3 528 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 NLE1Q9NVX2 485 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 CORO1CQ9ULV4 474 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-208ENST00000571043 KCTD3Q9Y597 815 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 ARL5AQ9Y689 179 aa17.36■□□□□ 0.37
RPAIN-208ENST00000571043 S1PR4O95977 384 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 PSMC3P17980 439 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 OGNP20774 298 aaKnown RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 SP100P23497 879 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 KPNA2P52292 529 aaKnown RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 NCALDP61601 193 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 HTR4Q13639 388 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 MRNIPQ6NTE8 343 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 RETSATQ6NUM9 610 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 LINGO4Q6UY18 593 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 ZYG11AQ6WRX3 759 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 METTL3Q86U44 580 aaKnown RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 CEP97Q8IW35 865 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 CENPLQ8N0S6 344 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 FIBINQ8TAL6 211 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 ACDQ96AP0 544 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 RMDN1Q96DB5 314 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 EXOC2Q96KP1 924 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 FAM83CQ9BQN1 747 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 C20orf27Q9GZN8 174 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 RASSF4Q9H2L5 321 aa17.35■□□□□ 0.37
RPAIN-208ENST00000571043 THG1LQ9NWX6 298 aaKnown RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 DUS2Q9NX74 493 aaKnown RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 KIAA1522Q9P206 1035 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 RUVBL2Q9Y230 463 aaKnown RBP17.35■□□□□ 0.37
RPAIN-208ENST00000571043 TMEM114B3SHH9 223 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 TRIM13O60858 407 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 UNC5CO95185 931 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 KLHL2O95198 593 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 GOT2P00505 430 aaKnown RBP17.34■□□□□ 0.37
RPAIN-208ENST00000571043 MYL2P10916 166 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 IL9P15248 144 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 ZNF140P52738 457 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-208ENST00000571043 ABCE1P61221 599 aaKnown RBP17.34■□□□□ 0.37
RPAIN-208ENST00000571043 RHOAP61586 193 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 AP1S1P61966 158 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 ITGA9Q13797 1035 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 WDR75Q8IWA0 830 aaKnown RBP17.34■□□□□ 0.37
RPAIN-208ENST00000571043 TMEM151AQ8N4L1 468 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 WFDC5Q8TCV5 224 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 PPP4R1Q8TF05 950 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 KCTD4Q8WVF5 259 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 NXPE3Q969Y0 559 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 KXD1Q9BQD3 176 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 FAM96AQ9H5X1 160 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 ZNF395Q9H8N7 513 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-208ENST00000571043 SAR1AQ9NR31 198 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 OXSMQ9NWU1 459 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 HEY2Q9UBP5 337 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 ZFP69BQ9UJL9 534 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 WNT6Q9Y6F9 365 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
RPAIN-208ENST00000571043 CCDC162PA2VCL2 907 aa17.33■□□□□ 0.37
RPAIN-208ENST00000571043 C2orf81A6NN90 581 aa17.33■□□□□ 0.37
RPAIN-208ENST00000571043 AURKAO14965 403 aa17.33■□□□□ 0.37
RPAIN-208ENST00000571043 CD3EAPO15446 510 aaKnown RBP17.33■□□□□ 0.37
RPAIN-208ENST00000571043 CYBBP04839 570 aa17.33■□□□□ 0.37
RPAIN-208ENST00000571043 CSNK1DP48730 415 aa17.33■□□□□ 0.37
RPAIN-208ENST00000571043 PLK1P53350 603 aa17.33■□□□□ 0.37
RPAIN-208ENST00000571043 SLC20A2Q08357 652 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms