RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PDCD2Q16342 344 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 C5orf22Q49AR2 442 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 WASHC2DQ5SRD0 308 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 FAM171A1Q5VUB5 890 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 AADACL2Q6P093 401 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 CCDC25Q86WR0 208 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 GALNT15Q8N3T1 639 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 FSIP1Q8NA03 581 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 B4GALNT2Q8NHY0 566 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 CD99L2Q8TCZ2 262 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 HDAC7Q8WUI4 952 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 ESR2Q92731 530 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 KTI12Q96EK9 354 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 ZNF419Q96HQ0 510 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 TTC14Q96N46 770 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 RPS6KC1Q96S38 1066 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 WDR77Q9BQA1 342 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 KRT23Q9C075 422 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 RBM38Q9H0Z9 239 aaKnown RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 ISCUQ9H1K1 167 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 HIPK3Q9H422 1215 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 RPAP3Q9H6T3 665 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 VCPKMTQ9H867 229 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 MRPL44Q9H9J2 332 aaKnown RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 ZDHHC7Q9NXF8 308 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 NYAP2Q9P242 653 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.3□□□□□ -1.72
NUP88-202ENST00000570937 CLIP2Q9UDT6 1046 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 KLQ9UEF7 1012 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 RABGAP1Q9Y3P9 1069 aa4.3□□□□□ -1.72
NUP88-202ENST00000570937 ROBO3Q96MS0 1386 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 RPS10-NUDT3A0A1W2PQS6 291 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 hCG_1642624A0A1W2PR95 340 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 F5H6K3 240 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 TNFRSF13BO14836 293 aaPredicted RBP4.29□□□□□ -1.72
NUP88-202ENST00000570937 IKBKBO14920 756 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 STRNO43815 780 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 CCNT1O60563 726 aaKnown RBP4.29□□□□□ -1.72
NUP88-202ENST00000570937 ZBED4O75132 1171 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PRDM1O75626 825 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 FLOT1O75955 427 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PRKCHP24723 683 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 CHMLP26374 656 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 TNFSF8P32971 234 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 COPB2P35606 906 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 CHKAP35790 457 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PNPLA4P41247 253 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 RPS6KA3P51812 740 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PRKAA2P54646 552 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 UBXN2AP68543 259 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 KLRC3Q07444 240 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PDCLQ13371 301 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 BIRC2Q13490 618 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 THOC5Q13769 683 aaKnown RBP4.29□□□□□ -1.72
NUP88-202ENST00000570937 PKP1Q13835 747 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 BMP2KLQ5H9B9 411 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 C10orf62Q5T681 223 aaPredicted RBP4.29□□□□□ -1.72
NUP88-202ENST00000570937 CCDC129Q6ZRS4 1044 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 SLC16A12Q6ZSM3 486 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 SYT13Q7L8C5 426 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 IQCA1Q86XH1 822 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 VPS52Q8N1B4 723 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 DPP10Q8N608 796 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 GMCL1P1Q8NEA9 526 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 ENGASEQ8NFI3 743 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 GABPB2Q8TAK5 448 aaPredicted RBP4.29□□□□□ -1.72
NUP88-202ENST00000570937 ACER1Q8TDN7 264 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 CHURC1Q8WUH1 139 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 ASB5Q8WWX0 329 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 KCNJ9Q92806 393 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 URB1-AS1Q96HZ7 61 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 UBAC1Q9BSL1 405 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PAGR1Q9BTK6 254 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 B3GNT4Q9C0J1 378 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 MROH8Q9H579 483 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PLEKHA2Q9HB19 425 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 MORF4L1Q9UBU8 362 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 PNMA2Q9UL42 364 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 ISY1Q9ULR0 285 aaKnown RBP4.29□□□□□ -1.72
NUP88-202ENST00000570937 STX8Q9UNK0 236 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 OSGIN2Q9Y236 505 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 COMMD10Q9Y6G5 202 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 OTOFQ9HC10 1997 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 MYH1P12882 1939 aa4.29□□□□□ -1.72
NUP88-202ENST00000570937 DOCK1Q14185 1865 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 MYO5AQ9Y4I1 1855 aaKnown RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 FOCADQ5VW36 1801 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 A0A1W2PRG0 241 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 ERICH2A1L162 156 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 SLC25A27O95847 323 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 TOP1P11387 765 aaKnown RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 FCGR2AP12318 317 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 LYL1P12980 280 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 CYP4B1P13584 511 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 ARSAP15289 507 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms