RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 CYP8B1Q9UNU6 501 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 AKT3Q9Y243 479 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 NOC2LQ9Y3T9 749 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 PCDHA9Q9Y5H5 950 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 BACE2Q9Y5Z0 518 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GPC6Q9Y625 555 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 MYLKQ15746 1914 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MIA3Q5JRA6 1907 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 EMSYQ7Z589 1322 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ANKRD36A6QL64 1941 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ATG2AQ2TAZ0 1938 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ANAPC1Q9H1A4 1944 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 DOCK6Q96HP0 2047 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 A0A1W2PQ09 198 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 A0A1W2PQJ5 194 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 C5orf51A6NDU8 294 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 FAM86C2PA6NEL3 165 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ZSCAN5BA6NJL1 495 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NOP56O00567 594 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 PODXLO00592 558 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CDK2AP1O14519 115 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 RASGRF2O14827 1237 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ATXN7O15265 892 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 OGTO15294 1046 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TP73O15350 636 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SLC16A3O15427 465 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 PRPF4O43172 522 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMG6-208ENST00000570874 B4GALT5O43286 388 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 DLX3O60479 287 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NPHS1O60500 1241 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 XYLBO75191 536 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 MTX2O75431 263 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CSDE1O75534 798 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 RPS6KA5O75582 802 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CIB2O75838 187 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TMCC1O94876 653 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SEC31AO94979 1220 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 AKR7A3O95154 331 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NDUFA10O95299 355 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 DIRAS3O95661 229 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LMNAP02545 664 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 TK1P04183 234 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ITGB3P05106 788 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LGALS2P05162 132 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ITGA2BP08514 1039 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ESRRAP11474 423 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 NCF1P14598 390 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 CYP2B6P20813 491 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SAT1P21673 171 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PCSK1P29120 753 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 LSP1P33241 339 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PCGF2P35227 344 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TNFSF9P41273 254 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GCLMP48507 274 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 HSPA13P48723 471 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 FMO5P49326 533 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 AARSP49588 968 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMG6-208ENST00000570874 GDI2P50395 445 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 CCR3P51677 355 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CLCN3P51790 818 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 VAMP7P51809 220 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SLC16A1P53985 500 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ATP12AP54707 1039 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 JAM2P57087 298 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NLRP11P59045 1033 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 RAB15P59190 212 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 POLR2GP62487 172 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMG6-208ENST00000570874 RAB1AP62820 205 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 FKBP1BP68106 108 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CYP4F2P78329 520 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PHC1P78364 1004 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 MYL7Q01449 175 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CYP4F3Q08477 520 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NIPAL4Q0D2K0 466 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TBL3Q12788 808 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 DMP1Q13316 513 aaPredicted RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 CRHR2Q13324 411 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 RAPSNQ13702 412 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GRB14Q14449 540 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TTLL4Q14679 1199 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CRYMQ14894 314 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CHRNA6Q15825 494 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NFIL3Q16649 462 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 HFEQ30201 348 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 SLC9B1Q4ZJI4 515 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 IGSF11Q5DX21 431 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ZNF628Q5EBL2 1059 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 GRTP1Q5TC63 336 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 NAA35Q5VZE5 725 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 ATG16L1Q676U5 607 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 PTRHD1Q6GMV3 140 aaKnown RBP3.58□□□□□ -1.84
SMG6-208ENST00000570874 HEPHL1Q6MZM0 1159 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 MFSD5Q6N075 450 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CYP4F22Q6NT55 531 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 RGMBQ6NW40 437 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 TMEM53Q6P2H8 277 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 CASC4Q6P4E1 433 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 BLOC1S3Q6QNY0 202 aa3.58□□□□□ -1.84
SMG6-208ENST00000570874 AFTPHQ6ULP2 937 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms