RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PRSS38A1L453 326 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 HAX1O00165 279 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 TULP2O00295 520 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 CACNB4O00305 520 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 KCNAB3O43448 404 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 ASS1P00966 412 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 UBA7P41226 1012 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 CCNHP51946 323 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 PTK2Q05397 1052 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 ILF3Q12906 894 aaKnown RBP eCLIP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 KYNUQ16719 465 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 CARD16Q5EG05 197 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 ARL6IP4Q66PJ3 421 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 RPUSD3Q6P087 351 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 FAM199XQ6PEV8 388 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 FAM180AQ6UWF9 173 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 TMEM207Q6UWW9 146 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 PLPP6Q8IY26 295 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 ZBTB2Q8N680 514 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 IRGQQ8WZA9 623 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 NCSTNQ92542 709 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 FUBP1Q96AE4 644 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 ZSCAN16Q9H4T2 348 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 SLC24A3Q9HC58 644 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 ZBTB20Q9HC78 741 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 EDARQ9UNE0 448 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 PCDHGC4Q9Y5F7 938 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 CSAG2Q9Y5P2 127 aa6.6□□□□□ -1.35
HERPUD1-217ENST00000569429 WNK1Q9H4A3 2382 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TLCD2A6NGC4 264 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 INAFM1C9JVW0 142 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TOX3O15405 576 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 PROM1O43490 865 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CREB3O43889 395 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 ENDOD1O94919 500 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 REC8O95072 547 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TIAF1O95411 115 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 APOEP02649 317 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 LTFP02788 710 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 DNASE1P24855 282 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 AK4P27144 223 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 HOXC12P31275 282 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TRIM23P36406 574 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 PPM1FP49593 454 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CASP4P49662 377 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 EPHA4P54764 986 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 SOX8P57073 446 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 SH3BP2P78314 561 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 RUNX1T1Q06455 604 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CDC16Q13042 620 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 ZACNQ401N2 412 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TMEM52BQ4KMG9 183 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 FAM26FQ5R3K3 315 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CES4AQ5XG92 561 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 FAAH2Q6GMR7 532 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 SPOPLQ6IQ16 392 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CYB5D1Q6P9G0 228 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 GFRALQ6UXV0 394 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 CAMKMTQ7Z624 323 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TTC7BQ86TV6 843 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 PLXDC1Q8IUK5 500 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 SIX6OS1Q8N1H7 587 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 GALNT16Q8N428 558 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 DCAF4L2Q8NA75 395 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 XXYLT1Q8NBI6 393 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 PLEKHO2Q8TD55 490 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 DQX1Q8TE96 717 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 NR4A3Q92570 626 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 TATDN2Q93075 761 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 VOPP1Q96AW1 172 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 C8orf76Q96K31 380 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 C9orf72Q96LT7 481 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 ZNF559Q9BR84 538 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 WRAP53Q9BUR4 548 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 MUC3BQ9H195 1237 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 EPB41L1Q9H4G0 881 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 KCNN3Q9UGI6 736 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 KLHL3Q9UH77 587 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 SNX7Q9UNH6 387 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 MAPK8IP1Q9UQF2 711 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
HERPUD1-217ENST00000569429 DRGXA6NNA5 263 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 LRRIQ3A6PVS8 624 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 KCNU1A8MYU2 1149 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 THAP12O43422 761 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 CLDN11O75508 207 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 C9P02748 559 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 PCCBP05166 539 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 FYNP06241 537 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 RAB40ALP0C0E4 278 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 HOXD13P35453 343 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SPAM1P38567 509 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SERPINH1P50454 418 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SNRPFP62306 86 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 PDE1BQ01064 536 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC20A2Q08357 652 aa6.58□□□□□ -1.36
HERPUD1-217ENST00000569429 BST2Q10589 180 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms