RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 UNC5DQ6UXZ4 953 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 C16orf59Q7L2K0 433 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 TAS1R1Q7RTX1 841 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 TMEM173Q86WV6 379 aaPredicted RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 CILP2Q8IUL8 1156 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 CNTN4Q8IWV2 1026 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 DBF4BQ8NFT6 615 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 CEP70Q8NHQ1 597 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 BTN2A3PQ96KV6 586 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 PRKD2Q9BZL6 878 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 KLHL4Q9C0H6 718 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 A0A087X1B8 175 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 SDHDO14521 159 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 SLC2A3P11169 496 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 POLE2P56282 527 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 RPS24P62847 133 aaKnown RBP8.77□□□□□ -1
LINC00558-201ENST00000569422 ZNF33AQ06730 810 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 CEACAM7Q14002 265 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 FRG1Q14331 258 aaKnown RBP8.77□□□□□ -1
LINC00558-201ENST00000569422 PFKFB4Q16877 469 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 TECRLQ5HYJ1 363 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 RTP2Q5QGT7 225 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 C16orf89Q6UX73 402 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 CYP2R1Q6VVX0 501 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 NEK10Q6ZWH5 1172 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 UMODL1-AS1Q8N2C9 162 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 EFHBQ8N7U6 833 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 DCBLD1Q8N8Z6 715 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 PCSK9Q8NBP7 692 aaKnown RBP8.77□□□□□ -1
LINC00558-201ENST00000569422 RP9Q8TA86 221 aaKnown RBP8.77□□□□□ -1
LINC00558-201ENST00000569422 CALML6Q8TD86 181 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 ESAMQ96AP7 390 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 ZNF512Q96ME7 567 aaPredicted RBP8.77□□□□□ -1
LINC00558-201ENST00000569422 SERPINI1Q99574 410 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 SEMA6AQ9H2E6 1030 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 EFCAB1Q9HAE3 211 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 BPIFA1Q9NP55 256 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 TLR8Q9NR97 1041 aaKnown RBP8.77□□□□□ -1
LINC00558-201ENST00000569422 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.77□□□□□ -1
LINC00558-201ENST00000569422 UBAP1Q9NZ09 502 aa8.77□□□□□ -1
LINC00558-201ENST00000569422 PDE4DIPQ5VU43 2346 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 CCDC162PA2VCL2 907 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 MAGEA13PA6NCF6 341 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 UBDO15205 165 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 E2F6O75461 281 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 MTRF1O75570 445 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 OAZ2O95190 189 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 CSPG5O95196 566 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 GLP2RO95838 553 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 LYNP07948 512 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 COL6A2P12110 1019 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 FMO4P31512 558 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 KIF19Q2TAC6 998 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PIWIL4Q7Z3Z4 852 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 DENND1CQ8IV53 801 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 DDIASQ8IXT1 998 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 ANKK1Q8NFD2 765 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 LRGUKQ96M69 825 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 KCNA7Q96RP8 456 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 NELL2Q99435 816 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 UPF3AQ9H1J1 476 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 ZBTB26Q9HCK0 441 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 SARS2Q9NP81 518 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PRDM5Q9NQX1 630 aaPredicted RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 GKN1Q9NS71 199 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 QPCTLQ9NXS2 382 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 VTI1BQ9UEU0 232 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PDCD11Q14690 1871 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 TSC2P49815 1807 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 A0A1W2PRQ8 180 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 UBXN8O00124 270 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 CBX4O00257 560 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 UBFD1O14562 309 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 DNAJA2O60884 412 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 AOC2O75106 756 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 S1PR4O95977 384 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 IGHA2P01877 340 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 ALDH2P05091 517 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 GFAPP14136 432 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 KPNA2P52292 529 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 COX10Q12887 443 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 MED21Q13503 144 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PTK2BQ14289 1009 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 SEMA3AQ14563 771 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 TRIM71Q2Q1W2 868 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 NADSYN1Q6IA69 706 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 SCIMPQ6UWF3 145 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 LINGO4Q6UY18 593 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 ARRDC2Q8TBH0 407 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PTERQ96BW5 349 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 C1orf74Q96LT6 269 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 NSUN5Q96P11 429 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 GBP5Q96PP8 586 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 MRPL1Q9BYD6 325 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 POLR1EQ9GZS1 481 aaKnown RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 STARD7Q9NQZ5 370 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 TMEM248Q9NWD8 314 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 CUEDC1Q9NWM3 386 aaPredicted RBP8.77□□□□□ -1.01
LINC00558-201ENST00000569422 SMPD4Q9NXE4 827 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 GMPR2Q9P2T1 348 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms