RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CLPBQ9H078 707 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 PRO3102Q9H379 93 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TDRD3Q9H7E2 651 aaKnown RBP3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 RMI1Q9H9A7 625 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 JMJD4Q9H9V9 463 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 PLEKHA2Q9HB19 425 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 FZD3Q9NPG1 666 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 G6PC2Q9NQR9 355 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 IRAK4Q9NWZ3 460 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 TTLL3Q9Y4R7 772 aa3.57□□□□□ -1.84
HMGB1P6-201ENST00000569046 CKAP5Q14008 2032 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 MAPK8IP3Q9UPT6 1336 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 A0A087X0M5 115 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRBV5-7A0A0A0MS05 114 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 A0A1B0GX30 115 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 PGPEP1LA6NFU8 196 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 MDM4O15151 490 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 INSIG1O15503 277 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TFRCP02786 760 aaKnown RBP3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 RPN1P04843 607 aaKnown RBP3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 CSF1P09603 554 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 GLULP15104 373 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 KLRC2P26717 231 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 PSMC4P43686 418 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 HTR6P50406 440 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 P2RX3P56373 397 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 NANOS2P60321 138 aaKnown RBP3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 MAPK7Q13164 816 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 PKP1Q13835 747 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 KRT32Q14532 448 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 ADCK5Q3MIX3 580 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCDC152Q4G0S7 254 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZNF517Q6ZMY9 492 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 ENOSF1Q7L5Y1 443 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 SCN4BQ8IWT1 228 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 KDM1BQ8NB78 822 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 CMASQ8NFW8 434 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 OR6Y1Q8NGX8 325 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 AFG1LQ8WV93 481 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZUFSPQ96AP4 578 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZBED3Q96IU2 234 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TTC14Q96N46 770 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 SDF4Q9BRK5 362 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 AP1M1Q9BXS5 423 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRIM31Q9BZY9 425 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMEM39BQ9GZU3 492 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 LMAN2LQ9H0V9 348 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 PREBQ9HCU5 417 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 SH3GLB2Q9NR46 395 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMEM160Q9NX00 188 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 NKIRAS2Q9NYR9 191 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 KLQ9UEF7 1012 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 SLC25A13Q9UJS0 675 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 BAG5Q9UL15 447 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 GPR34Q9UPC5 381 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 PLXNB2O15031 1838 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 FRMPD3Q5JV73 1810 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 PHIPQ8WWQ0 1821 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 ATAD5Q96QE3 1844 aa3.56□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRIOBPQ9H2D6 2365 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 MED23Q9ULK4 1368 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PTPRFP10586 1907 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 SYNDIG1LA6NDD5 238 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 C17orf100A8MU93 164 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 F5H0A9 414 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 HNRNPRO43390 633 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PLOD3O60568 738 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 OAZ2O95190 189 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 SNHG28P0DPA3 235 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMPOP42166 694 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 STAT1P42224 750 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 KCNJ4P48050 445 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PAPOLAP51003 745 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PRKCZQ05513 592 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 ALKBH1Q13686 389 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 VGLL4Q14135 290 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 CCNG2Q16589 344 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PLK5Q496M5 336 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 GXYLT1Q4G148 440 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 ALG10Q5BKT4 473 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 ALG10BQ5I7T1 473 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZNF484Q5JVG2 852 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 SLC9C2Q5TAH2 1124 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 VWA5B1Q5TIE3 1220 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 DAB2IPQ5VWQ8 1189 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 AAGABQ6PD74 315 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRAPPC11Q7Z392 1133 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZDHHC17Q8IUH5 632 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 SLC25A41Q8N5S1 370 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 RAET1EQ8TD07 263 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 U2AF1L4Q8WU68 220 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 THAP4Q8WY91 577 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 RFFLQ8WZ73 363 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 GOLGA1Q92805 767 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 HVCN1Q96D96 273 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 KTI12Q96EK9 354 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 COG8Q96MW5 612 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 DEFB118Q96PH6 123 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms