RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CNGA3Q16281 694 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 APTXQ7Z2E3 356 aaKnown RBP15.54■□□□□ 0.08
NME3-211ENST00000568561 HEATR4Q86WZ0 1026 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 NRROSQ86YC3 692 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 RCBTB1Q8NDN9 531 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 ANKRD20A12PQ8NF67 263 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 PMEPA1Q969W9 287 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 COQ10AQ96MF6 247 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 NUDT22Q9BRQ3 303 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 SYT11Q9BT88 431 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 PCDHGC4Q9Y5F7 938 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 HEMK1Q9Y5R4 338 aaPredicted RBP15.54■□□□□ 0.08
NME3-211ENST00000568561 FLNCQ14315 2725 aa15.54■□□□□ 0.08
NME3-211ENST00000568561 A0A0U1RQS6 177 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 GOLGA6CA6NDK9 693 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 GOLGA6BA6NDN3 693 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 NUDT21O43809 227 aaKnown RBP15.53■□□□□ 0.08
NME3-211ENST00000568561 WISP1O95388 367 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 GOLGA6DP0CG33 693 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 MYCLP1P12525 358 aaPredicted RBP15.53■□□□□ 0.08
NME3-211ENST00000568561 CCL4P13236 92 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 ATP1A3P13637 1013 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 CCNB1P14635 433 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 PNLIPP16233 465 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 CDK11BP21127 795 aaKnown RBP15.53■□□□□ 0.08
NME3-211ENST00000568561 TNFAIP3P21580 790 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 LHCGRP22888 699 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 ALDH4A1P30038 563 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 MIPP30301 263 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 ETV3P41162 512 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 GNPDA1P46926 289 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 AP1S1P61966 158 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 POLR2LP62875 67 aaKnown RBP15.53■□□□□ 0.08
NME3-211ENST00000568561 KCNC4Q03721 635 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 DPYSQ14117 519 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 ZNF235Q14590 738 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 LBRQ14739 615 aaKnown RBP15.53■□□□□ 0.08
NME3-211ENST00000568561 TMCO4Q5TGY1 634 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 PLEKHA7Q6IQ23 1121 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 SLC30A9Q6PML9 568 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 HSD11B1LQ7Z5J1 315 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 IRF2BP2Q7Z5L9 587 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 KIAA1524Q8TCG1 905 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 ZDHHC1Q8WTX9 485 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 HTR3CQ8WXA8 447 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 PSKH2Q96QS6 385 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 CMKLR1Q99788 373 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 FAM117AQ9C073 453 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 HSD3B7Q9H2F3 369 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 PARVAQ9NVD7 372 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 GOLGA6AQ9NYA3 693 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 DONSONQ9NYP3 566 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 CWC15Q9P013 229 aaKnown RBP15.53■□□□□ 0.08
NME3-211ENST00000568561 SEPT3Q9UH03 358 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 ST14Q9Y5Y6 855 aa15.53■□□□□ 0.08
NME3-211ENST00000568561 TMEM191CA6NGB0 347 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 RHPN2P1A8MT19 583 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 PRPSAP2O60256 369 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 CPNE6O95741 557 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 CPP00450 1065 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 FGF1P05230 155 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 CEACAM5P06731 702 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 HOXC4P09017 264 aaPredicted RBP15.52■□□□□ 0.08
NME3-211ENST00000568561 TCF4P15884 667 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 POLD2P49005 469 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 NSUN2Q08J23 767 aaKnown RBP eCLIP15.52■□□□□ 0.08
NME3-211ENST00000568561 TRAF2Q12933 501 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 RFTN1Q14699 578 aaPredicted RBP15.52■□□□□ 0.08
NME3-211ENST00000568561 DOK6Q6PKX4 331 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 RBM43Q6ZSC3 357 aaKnown RBP15.52■□□□□ 0.08
NME3-211ENST00000568561 PGBD5Q8N414 524 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 GPBAR1Q8TDU6 330 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 PHPT1Q9NRX4 125 aaPredicted RBP15.52■□□□□ 0.08
NME3-211ENST00000568561 ETNK2Q9NVF9 386 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 SEPT10Q9P0V9 454 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 TAAR2Q9P1P5 351 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 SUFUQ9UMX1 484 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 PLEKHM1Q9Y4G2 1056 aa15.52■□□□□ 0.08
NME3-211ENST00000568561 NPIPB15A6NHN6 443 aaPredicted RBP15.51■□□□□ 0.07
NME3-211ENST00000568561 LRRC53A6NM62 1247 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 EIF3CLB5ME19 914 aaKnown RBP15.51■□□□□ 0.07
NME3-211ENST00000568561 LRCH4O75427 683 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 RNF8O76064 485 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 HEXIM1O94992 359 aaKnown RBP15.51■□□□□ 0.07
NME3-211ENST00000568561 ECEL1O95672 775 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 MPSTP25325 297 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 VIPR1P32241 457 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 MAXP61244 160 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 ILF3Q12906 894 aaKnown RBP eCLIP15.51■□□□□ 0.07
NME3-211ENST00000568561 NCAPHQ15003 741 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 STX1AQ16623 288 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 TBR1Q16650 682 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 TSR1Q2NL82 804 aaKnown RBP15.51■□□□□ 0.07
NME3-211ENST00000568561 SMTNL2Q2TAL5 461 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 NKAIN2Q5VXU1 208 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 E4F1Q66K89 784 aaPredicted RBP15.51■□□□□ 0.07
NME3-211ENST00000568561 RAET1GQ6H3X3 334 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 SASS6Q6UVJ0 657 aa15.51■□□□□ 0.07
NME3-211ENST00000568561 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
NME3-211ENST00000568561 RFLNAQ6ZTI6 216 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms