RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 XKR5Q6UX68 686 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 POLNQ7Z5Q5 900 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 ARFGAP1Q8N6T3 406 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 NIPA2Q8N8Q9 360 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 PLA2G15Q8NCC3 412 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 OR1E3Q8WZA6 343 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 CCNL2Q96S94 520 aaPredicted RBP18.63■□□□□ 0.57
LINC01238-205ENST00000567549 MGME1Q9BQP7 344 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 CAAP1Q9H8G2 361 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 CPNE5Q9HCH3 593 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 FGF22Q9HCT0 170 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 TRNAU1APQ9NX07 287 aaKnown RBP18.63■□□□□ 0.57
LINC01238-205ENST00000567549 LRIT1Q9P2V4 623 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 ACSL6Q9UKU0 697 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 PCDHB11Q9Y5F2 797 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 A0A1W2PQJ5 194 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 TMEM202A6NGA9 273 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 B4DGG1 531 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 K7ENP7 123 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 PRKCGP05129 697 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 CELA2BP08218 269 aaPredicted RBP18.62■□□□□ 0.57
LINC01238-205ENST00000567549 CD82P27701 267 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 UGT1A5P35504 534 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 ZSCAN23Q3MJ62 389 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 CCDC122Q5T0U0 273 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 SPECC1LQ69YQ0 1117 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 INO80CQ6PI98 192 aaPredicted RBP18.62■□□□□ 0.57
LINC01238-205ENST00000567549 SCRN2Q96FV2 425 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 PRR11Q96HE9 360 aaPredicted RBP18.62■□□□□ 0.57
LINC01238-205ENST00000567549 COQ10AQ96MF6 247 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 CSPG4P5Q96PW8 444 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 DPYSL5Q9BPU6 564 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 B3GNT4Q9C0J1 378 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 CDH19Q9H159 772 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 CARS2Q9HA77 564 aaKnown RBP18.62■□□□□ 0.57
LINC01238-205ENST00000567549 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 AMACRQ9UHK6 382 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 ATXN7L1Q9ULK2 861 aaPredicted RBP18.62■□□□□ 0.57
LINC01238-205ENST00000567549 SSUH2Q9Y2M2 353 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 COL27A1Q8IZC6 1860 aaPredicted RBP18.62■□□□□ 0.57
LINC01238-205ENST00000567549 UNC13CQ8NB66 2214 aa18.62■□□□□ 0.57
LINC01238-205ENST00000567549 GOLGA6CA6NDK9 693 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 GOLGA6BA6NDN3 693 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 RHPN2P1A8MT19 583 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 MYO1FO00160 1098 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 NVLO15381 856 aaKnown RBP18.61■□□□□ 0.57
LINC01238-205ENST00000567549 MAFKO60675 156 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 HEXIM1O94992 359 aaKnown RBP18.61■□□□□ 0.57
LINC01238-205ENST00000567549 TPM3P06753 285 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 GOLGA6DP0CG33 693 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 CCNB1P14635 433 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 ZNF30P17039 623 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 PDX1P52945 283 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 HLTFQ14527 1009 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC01238-205ENST00000567549 TCEA2Q15560 299 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 SMTNL2Q2TAL5 461 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 RAET1GQ6H3X3 334 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 ARHGAP36Q6ZRI8 547 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 CYP4V2Q6ZWL3 525 aaPredicted RBP18.61■□□□□ 0.57
LINC01238-205ENST00000567549 SPRED1Q7Z699 444 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 PIM3Q86V86 326 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 MAP7D3Q8IWC1 876 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 RAVER1Q8IY67 606 aaKnown RBP18.61■□□□□ 0.57
LINC01238-205ENST00000567549 ZSCAN1Q8NBB4 408 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 CCDC112Q8NEF3 446 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 DTD2Q96FN9 168 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 TEX101Q9BY14 249 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 POLR1EQ9GZS1 481 aaKnown RBP18.61■□□□□ 0.57
LINC01238-205ENST00000567549 TMEM168Q9H0V1 697 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 GOLGA6AQ9NYA3 693 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 ANAPC7Q9UJX3 599 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 PCDHGC4Q9Y5F7 938 aa18.61■□□□□ 0.57
LINC01238-205ENST00000567549 CPNE6O95741 557 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 SERPING1P05155 500 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 RARAP10276 462 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 CR2P20023 1033 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 AMPD1P23109 780 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 SLC5A2P31639 672 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 SSR1P43307 286 aaKnown RBP18.6■□□□□ 0.57
LINC01238-205ENST00000567549 GPR3P46089 330 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 EPHB1P54762 984 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 CNGA3Q16281 694 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 DENND2CQ68D51 928 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 HEATR4Q86WZ0 1026 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 Q8N9G6 341 aaPredicted RBP18.6■□□□□ 0.57
LINC01238-205ENST00000567549 GPBAR1Q8TDU6 330 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 TRIM7Q9C029 511 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 WDR70Q9NW82 654 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 LOXL2Q9Y4K0 774 aa18.6■□□□□ 0.57
LINC01238-205ENST00000567549 A0A1W2PQM1 296 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 A8MX80 341 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 GOLGA6L19H0YKK7 550 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 NOBOXO60393 691 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 PGLSO95336 258 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 PRB1P04280 392 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 LIPCP11150 499 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 SKILP12757 684 aa18.59■□□□□ 0.57
LINC01238-205ENST00000567549 ZBED6P86452 979 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms