RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
RNF40-211ENST00000567365 A0A1B0GTQ1 180 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 CES2O00748 559 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 CEP104O60308 925 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 MAGEC1O60732 1142 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 PMPCBO75439 489 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 METTL18O95568 372 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 ITGAVP06756 1048 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 THEGLP0DJG4 465 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 ZNF30P17039 623 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 NFKBIAP25963 317 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 PSMB4P28070 264 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 STIP1P31948 543 aaKnown RBP12.42□□□□□ -0.42
RNF40-211ENST00000567365 TRIM23P36406 574 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 YPEL5P62699 121 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 GALNT3Q14435 633 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 LRRC14Q15048 493 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 ITPRIPL1Q6GPH6 555 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 ESRP1Q6NXG1 681 aaKnown RBP12.42□□□□□ -0.42
RNF40-211ENST00000567365 Q6ZSR6 202 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 Q6ZVL8 140 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 ADAT2Q7Z6V5 191 aaKnown RBP12.42□□□□□ -0.42
RNF40-211ENST00000567365 PIP4P1Q86T03 277 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 COG1Q8WTW3 980 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 FUBP1Q96AE4 644 aaKnown RBP12.42□□□□□ -0.42
RNF40-211ENST00000567365 SKA1Q96BD8 255 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 KLHDC7BQ96G42 594 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 MS4A14Q96JA4 679 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 WDR24Q96S15 920 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 OSBPL9Q96SU4 736 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 C1QTNF7Q9BXJ2 289 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 GAREM1Q9H706 876 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 MAGEE1Q9HCI5 957 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 UBP1Q9NZI7 540 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 RSPH14Q9UHP6 348 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 SNX12Q9UMY4 172 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 DRG1Q9Y295 367 aaKnown RBP12.42□□□□□ -0.42
RNF40-211ENST00000567365 PCDHGB2Q9Y5G2 931 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 SPO11Q9Y5K1 396 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 LRP4O75096 1905 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 SPTBN2O15020 2390 aa12.42□□□□□ -0.42
RNF40-211ENST00000567365 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 K7ESM1 405 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 TOR1BO14657 336 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 FPGTO14772 594 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 LZTS3O60299 673 aaPredicted RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 CER1O95813 267 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 SOD1P00441 154 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 HOXC4P09017 264 aaPredicted RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 TEAD1P28347 426 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 ETV3P41162 512 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 CHRNA4P43681 627 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 RABIFP47224 123 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 EPHB1P54762 984 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 C21orf59P57076 290 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 DPTQ07507 201 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 SLC14A1Q13336 389 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 MTM1Q13496 603 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 FZD2Q14332 565 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 SLC1A5Q15758 541 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 PCSK7Q16549 785 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 CYP1B1Q16678 543 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 PARP6Q2NL67 630 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 P3H1Q32P28 736 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 SIRPB2Q5JXA9 342 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 PRAMEF14Q5SWL7 426 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 PAPD7Q5XG87 772 aaKnown RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 DENND5AQ6IQ26 1287 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 ZNF765Q7L2R6 523 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 DCP2Q8IU60 420 aaKnown RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 GLIS1Q8NBF1 620 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 ACTRT1Q8TDG2 376 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 MAIP1Q8WWC4 291 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 IFT43Q96FT9 208 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 ELF4Q99607 663 aaPredicted RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 FERMT1Q9BQL6 677 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 GTPBP2Q9BX10 602 aaKnown RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 CAAP1Q9H8G2 361 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 ARNT2Q9HBZ2 717 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 KCTD5Q9NXV2 234 aa12.41□□□□□ -0.42
RNF40-211ENST00000567365 NFKBIL1Q9UBC1 381 aaPredicted RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 PNMA8BQ9ULN7 279 aaPredicted RBP12.41□□□□□ -0.42
RNF40-211ENST00000567365 F5H423 210 aaPredicted RBP12.4□□□□□ -0.42
RNF40-211ENST00000567365 DFNA5O60443 496 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 ANXA9O76027 345 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 STK10O94804 968 aaKnown RBP12.4□□□□□ -0.42
RNF40-211ENST00000567365 CLDN7O95471 211 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 HLA-DPA1P20036 260 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 SDHBP21912 280 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 MSNP26038 577 aaKnown RBP12.4□□□□□ -0.42
RNF40-211ENST00000567365 SPINT3P49223 89 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 ATXN3P54252 364 aaPredicted RBP12.4□□□□□ -0.42
RNF40-211ENST00000567365 GEMP55040 296 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 EIF2B5Q13144 721 aaKnown RBP12.4□□□□□ -0.42
RNF40-211ENST00000567365 OLIG2Q13516 323 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms