RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 NKAIN2Q5VXU1 208 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 ARHGAP17Q68EM7 881 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 BNC2Q6ZN30 1099 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-216ENST00000567071 DPY19L3Q6ZPD9 716 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 FJX1Q86VR8 437 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 PARP9Q8IXQ6 854 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 DRC7Q8IY82 874 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 SCML4Q8N228 414 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 PARD3BQ8TEW8 1205 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 ZDHHC1Q8WTX9 485 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 TATDN2Q93075 761 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 PDXPQ96GD0 296 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 MRFAP1L1Q96HT8 127 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-216ENST00000567071 CRACR2AQ9BSW2 395 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 APOOQ9BUR5 198 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 APMAPQ9HDC9 416 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 MBNL1Q9NR56 388 aaKnown RBP9.74□□□□□ -0.85
CAPN3-216ENST00000567071 SUCOQ9UBS9 1254 aaKnown RBP9.74□□□□□ -0.85
CAPN3-216ENST00000567071 ITM2BQ9Y287 266 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 B3GNT3Q9Y2A9 372 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 WASF2Q9Y6W5 498 aa9.74□□□□□ -0.85
CAPN3-216ENST00000567071 ABCA4P78363 2273 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 NSD1Q96L73 2696 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-216ENST00000567071 IGHV1OR21-1A0A087WYE8 117 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 LRRC10BA6NIK2 292 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 C16orf96A6NNT2 1141 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 C21orf140B9A014 251 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 MMP20O60882 483 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 ENDOD1O94919 500 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 MT-CO1P00395 513 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 HLA-DRAP01903 254 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 KELP23276 732 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 CSF2RBP32927 897 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 GARSP41250 739 aaKnown RBP9.73□□□□□ -0.85
CAPN3-216ENST00000567071 KLK7P49862 253 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 MXI1P50539 228 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 UGT8Q16880 541 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 ZNF630Q2M218 657 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-216ENST00000567071 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
CAPN3-216ENST00000567071 ZACNQ401N2 412 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 LYPLAL1Q5VWZ2 237 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 SFTPA2Q8IWL1 248 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 TP53I13Q8NBR0 393 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-216ENST00000567071 SPC24Q8NBT2 197 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 GALNT6Q8NCL4 622 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 OR10G6Q8NH81 332 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 ALG14Q96F25 216 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 RPRD1AQ96P16 312 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-216ENST00000567071 MDFIQ99750 246 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 ZDHHC6Q9H6R6 413 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 GPR83Q9NYM4 423 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 TMEM9Q9P0T7 183 aa9.73□□□□□ -0.85
CAPN3-216ENST00000567071 MDC1Q14676 2089 aaKnown RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 SSU72P8A0A1W2PR75 194 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 K7ERQ8 282 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 RNF103O00237 685 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 TULP2O00295 520 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 CACNB4O00305 520 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 KCNN4O15554 427 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 STX10O60499 249 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 MT-ND3P03897 115 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 SETSIPP0DME0 302 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 ABL2P42684 1182 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 CLDN10P78369 228 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 APBA1Q02410 837 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 FOXM1Q08050 763 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 PLEKHN1Q494U1 663 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 CXXC5Q7LFL8 322 aaKnown RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 VSTM4Q8IW00 320 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 ZNF295-AS1Q8N0V1 137 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 PCDH20Q8N6Y1 951 aaKnown RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 OR56A4Q8NGH8 313 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 DQX1Q8TE96 717 aaKnown RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 C14orf79Q96F83 325 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 SLC39A13Q96H72 371 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 TMEM168Q9H0V1 697 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 ACTL8Q9H568 366 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 XPO7Q9UIA9 1087 aaKnown RBP9.72□□□□□ -0.85
CAPN3-216ENST00000567071 VPS51Q9UID3 782 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 MOSPD1Q9UJG1 213 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 TSPAN16Q9UKR8 245 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 PADI1Q9ULC6 663 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 OR1A2Q9Y585 309 aa9.72□□□□□ -0.85
CAPN3-216ENST00000567071 FLNAP21333 2647 aaKnown RBP9.71□□□□□ -0.85
CAPN3-216ENST00000567071 KCNU1A8MYU2 1149 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 SMAD6O43541 496 aaKnown RBP9.71□□□□□ -0.86
CAPN3-216ENST00000567071 SNAP91O60641 907 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 CLDN11O75508 207 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 CEACAM4O75871 244 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 MAP3K6O95382 1288 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 ECEL1O95672 775 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 F9P00740 461 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 RHOCP08134 193 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 TIMP2P16035 220 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 CDC25BP30305 580 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 GTF2H1P32780 548 aa9.71□□□□□ -0.86
CAPN3-216ENST00000567071 PBX1P40424 430 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms