RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 TRIM55Q9BYV6 548 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 CIPCQ9C0C6 399 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 RASSF4Q9H2L5 321 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 ELOVL2Q9NXB9 296 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 SLC2A6Q9UGQ3 507 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 PLA2G4CQ9UP65 541 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 CHKBQ9Y259 395 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 HS3ST2Q9Y278 367 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
NSMCE1-208ENST00000565070 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SNAP91O60641 907 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 VAPBO95292 243 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 PAPSS2O95340 614 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 PROCP04070 461 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ATXN1LP0C7T5 689 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 GLDCP23378 1020 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 GABRB3P28472 473 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 POLD2P49005 469 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 GALK1P51570 392 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ARF5P84085 180 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 OVGP1Q12889 678 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CHI3L2Q15782 390 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CNGA3Q16281 694 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SPDYAQ5MJ70 313 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 C16orf46Q6P387 395 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 TPRG1Q6ZUI0 275 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 KDELC2Q7Z4H8 507 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CHFRQ96EP1 664 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 LRRC37BQ96QE4 947 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SEPT3Q9UH03 358 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 FBXL21Q9UKT6 434 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 MRPS17Q9Y2R5 130 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 A0A096LPK6 155 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CCDC78A2IDD5 438 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 MUSKO15146 869 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 TRIM24O15164 1050 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 EPOP01588 193 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 AHSGP02765 367 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 F7P08709 466 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SKIV2L2P42285 1042 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ZNF235Q14590 738 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SETDB1Q15047 1291 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CCDC153Q494R4 210 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 FBXO43Q4G163 708 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 TMEM196Q5HYL7 178 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SIRPB2Q5JXA9 342 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ZNF852Q6ZMS4 543 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SLC25A41Q8N5S1 370 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 RFWD2Q8NHY2 731 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 FAM3CQ92520 227 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ATXN7L3BQ96GX2 97 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 FEM1CQ96JP0 617 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 SEMA3CQ99985 751 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 MGME1Q9BQP7 344 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CINPQ9BW66 212 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 CEP44Q9C0F1 390 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 KCNK13Q9HB14 408 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ARHGEF3Q9NR81 526 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 ERVW-1Q9UQF0 538 aa12.7□□□□□ -0.38
NSMCE1-208ENST00000565070 UNC80Q8N2C7 3258 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 TTC24A2A3L6 582 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 MROH6A6NGR9 719 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 CD160O95971 181 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 C2P06681 752 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 CDK18Q07002 472 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 GRM3Q14832 879 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 PCLAFQ15004 111 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 PON2Q15165 354 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 KIAA0408Q6ZU52 694 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 NLRP9Q7RTR0 991 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 C2CD4AQ8NCU7 369 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 ACVR1CQ8NER5 493 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 ISG20Q96AZ6 181 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 PSKH2Q96QS6 385 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 FAM167BQ9BTA0 163 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 CAB39LQ9H9S4 337 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 THAP1Q9NVV9 213 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 F5P12259 2224 aa12.69□□□□□ -0.38
NSMCE1-208ENST00000565070 GJB3O75712 270 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 TMCC1O94876 653 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 FGF3P11487 239 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 HLA-DPA1P20036 260 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 SLC1A2P43004 574 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 ABCG1P45844 678 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 NCALDP61601 193 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 SEPT6Q14141 434 aa12.68□□□□□ -0.38
NSMCE1-208ENST00000565070 DLG2Q15700 870 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms