RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 MCUBQ9NWR8 336 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SIRPGQ9P1W8 387 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ABCD2Q9UBJ2 740 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4Q9UBX2 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 KIF25Q9UIL4 384 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SHOC2Q9UQ13 582 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 BAIAP2Q9UQB8 552 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PCDHGB1Q9Y5G3 927 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 A0A087X0B3 334 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CCDC182A6NF36 153 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 A8MU76 341 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MPTX1A8MV57 137 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PRR5-ARHGAP8B1AHC4 643 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 USP17L13C9JLJ4 530 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 USP17L17D6RBQ6 530 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 H7C2Y5 167 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SGK1O00141 431 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 GPR25O00155 361 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 KCNK1O00180 336 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TRAF5O00463 557 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SYN3O14994 580 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 RGS5O15539 181 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CYP26A1O43174 497 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PSTPIP1O43586 416 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SYNCRIPO60506 623 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 LPXNO60711 386 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 EIF1BO60739 113 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 LILRB5O75023 590 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 USP12O75317 370 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SNNO75324 88 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 AVILO75366 819 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MED24O75448 989 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TADA2AO75478 443 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 USP2O75604 605 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SUPT7LO94864 414 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 IL18RAPO95256 599 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PROCP04070 461 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CYP11A1P05108 521 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 HBQ1P09105 142 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 H2AFB1P0C5Y9 115 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 H2AFB2P0C5Z0 115 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 RRASP10301 218 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 BMP4P12644 408 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PRG2P13727 222 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CPB1P15086 417 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 HOXB6P17509 224 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TNNI3P19429 210 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CTHP32929 405 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 HNF4AP41235 474 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 EIF1P41567 113 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ATP5OP48047 213 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 NKX3-2P78367 333 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 KCNJ10P78508 379 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ARHGAP8P85298 464 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 RHDQ02161 417 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CREMQ03060 361 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MERTKQ12866 999 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DUSP4Q13115 394 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 FADDQ13158 208 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 STX5Q13190 355 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 GRAPQ13588 217 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 EMC2Q15006 297 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PPA1Q15181 289 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 BAK1Q16611 211 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DUSP6Q16828 381 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CCDC142Q17RM4 750 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 KNOP1Q1ED39 458 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 KIZQ2M2Z5 673 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 BTBD16Q32M84 506 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PIGGQ5H8A4 983 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TTC38Q5R3I4 469 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 COL13A1Q5TAT6 717 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TPGS2Q68CL5 300 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DESI1Q6ICB0 168 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PDE12Q6L8Q7 609 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SWSAP1Q6NVH7 229 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM81Q6P7N7 255 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CNSTQ6PJW8 725 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SPOCD1Q6ZMY3 1216 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF517Q6ZMY9 492 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TAS1R3Q7RTX0 852 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MAMDC2Q7Z304 686 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 GALNT10Q86SR1 603 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SEPT12Q8IYM1 358 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SLC25A41Q8N5S1 370 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PCDH20Q8N6Y1 951 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 AMER2Q8N7J2 671 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TTLL6Q8N841 843 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 GDPD1Q8N9F7 314 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 LPCAT1Q8NF37 534 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 OR52H1Q8NGJ2 320 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 OR13J1Q8NGT2 312 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MAGEE2Q8TD90 523 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ELP5Q8TE02 316 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms