RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 GOLGA7BQ2TAP0 167 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ATAD3BQ5T9A4 648 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 UBE2UQ5VVX9 321 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PPP2R2DQ66LE6 453 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SLC41A1Q8IVJ1 513 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PDZD8Q8NEN9 1154 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PSD2Q9BQI7 771 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 UBP1Q9NZI7 540 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PKD2L2Q9NZM6 624 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ANKMY1Q9P2S6 941 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 UBDO15205 165 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 NRP2O60462 931 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 MMP3P08254 477 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 LCP1P13796 627 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 FSHRP23945 695 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SLC26A2P50443 739 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 NEK2P51955 445 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 GJA9P57773 515 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 TRAP1Q12931 704 aaKnown RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 USP10Q14694 798 aaKnown RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SAMD4BQ5PRF9 694 aaKnown RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 CLEC6AQ6EIG7 209 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SLCO6A1Q86UG4 719 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PELI3Q8N2H9 469 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 C1QTNF1Q9BXJ1 281 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ADAMTS10Q9H324 1103 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 EXD2Q9NVH0 621 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ARMC1Q9NVT9 282 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SMPD3Q9NY59 655 aaPredicted RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 KLK14Q9P0G3 267 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SEPT3Q9UH03 358 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PTGDR2Q9Y5Y4 395 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 A0A0A0MRY4 1105 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 NOTOA8MTQ0 251 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 SNRPB2P08579 225 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 MYL3P08590 195 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 BDNFP23560 247 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ADORA2BP29275 332 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 CENPLQ8N0S6 344 aaPredicted RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 DNAAF3Q8N9W5 541 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 SPATA13Q96N96 652 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ABHD16BQ9H3Z7 469 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 SLCO3A1Q9UIG8 710 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 TLK1Q9UKI8 766 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 GPSM3Q9Y4H4 160 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 AP3B1O00203 1094 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 MED7O43513 233 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 GPC4O75487 556 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 BMP4P12644 408 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 KCNA5P22460 613 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 PSMD8P48556 350 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ARPC4P59998 168 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 OCA2Q04671 838 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF846Q147U1 533 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 CYP51A1Q16850 503 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 VPS26BQ4G0F5 336 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ANKRD34AQ69YU3 496 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 CATSPER4Q7RTX7 472 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 R3HCC1LQ7Z5L2 792 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 RNF135Q8IUD6 432 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 CCDC185Q8N715 623 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 TXNDC5Q8NBS9 432 aaKnown RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 P2RY11Q96G91 374 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 RNF38Q9H0F5 515 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 TBC1D13Q9NVG8 400 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 PRMT7Q9NVM4 692 aaPredicted RBP16.31■□□□□ 0.2
LINC00554-201ENST00000564841 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 NUDT5Q9UKK9 219 aa16.31■□□□□ 0.2
LINC00554-201ENST00000564841 ZCWPW2A0A1B0GU75 182 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 H0Y858 1186 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 INMTO95050 263 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CPNE6O95741 557 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 AKAP5P24588 427 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF773Q6PK81 442 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 SLC16A12Q6ZSM3 486 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 KIAA2013Q8IYS2 634 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 MAGED4Q96JG8 741 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 QKIQ96PU8 341 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00554-201ENST00000564841 MRPL45Q9BRJ2 306 aaKnown RBP16.3■□□□□ 0.2
LINC00554-201ENST00000564841 TRIT1Q9H3H1 467 aaKnown RBP16.3■□□□□ 0.2
LINC00554-201ENST00000564841 DPEP3Q9H4B8 488 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 TLR9Q9NR96 1032 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 TRIP11Q15643 1979 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 DYTNA2CJ06 578 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 SLC22A2O15244 555 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 GAS2O43903 313 aaKnown RBP16.3■□□□□ 0.2
LINC00554-201ENST00000564841 MFSD11O43934 449 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 RASAL1O95294 804 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms