RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 KIAA1524Q8TCG1 905 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 GPBAR1Q8TDU6 330 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 OR1E3Q8WZA6 343 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 CCDC74AQ96AQ1 378 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 NUS1Q96E22 293 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 NUP85Q9BW27 656 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 TEX101Q9BY14 249 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 LRRN3Q9H3W5 708 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 ETNK2Q9NVF9 386 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 TRNAU1APQ9NX07 287 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 ANAPC7Q9UJX3 599 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 DNPEPQ9ULA0 475 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 PCDHGA7Q9Y5G6 932 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 LOC400499M0QZD8 3231 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 A0A087X0T9 212 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 A0A1W2PNU3 283 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 KLK10O43240 276 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 TNFSF15O95150 251 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 PGLSO95336 258 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CPP00450 1065 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 TPM3P06753 285 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 FAM228BP0C875 321 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 PTMSP20962 102 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 IL4RP24394 825 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CCKBRP32239 447 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 INHBCP55103 352 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CXADRP78310 365 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CCL7P80098 99 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 SLC25A11Q02978 314 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 PDK2Q15119 407 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 NFKBIBQ15653 356 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CERCAMQ5T4B2 595 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CRTC1Q6UUV9 634 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 USP45Q70EL2 814 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 TP53INP2Q8IXH6 220 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 PGBD5Q8N414 524 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 FBXO39Q8N4B4 442 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 PDCD6IPQ8WUM4 868 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 DTD2Q96FN9 168 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 PDXPQ96GD0 296 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 NSMCE3Q96MG7 304 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 TSGA13Q96PP4 275 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 MCCC1Q96RQ3 725 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 B3GNT4Q9C0J1 378 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 CYP4F12Q9HCS2 524 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 FGF22Q9HCT0 170 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 SIRPGQ9P1W8 387 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 UVRAGQ9P2Y5 699 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.461e-7■■■■□ 22.2
GTF3C1-204ENST00000564664 UNC13CQ8NB66 2214 aa12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 SMG1Q96Q15 3661 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-204ENST00000564664 ANKRD36A6QL64 1941 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 PRSS38A1L453 326 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 A8MX80 341 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 D6RAR5 112 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 PLD2O14939 933 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 MATN3O15232 486 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 NOBOXO60393 691 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 RPLP0P05388 317 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 CCNB1P14635 433 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNF30P17039 623 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 MX2P20592 715 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 CA4P22748 312 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 CCNCP24863 283 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 HNRNPH3P31942 346 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 ARSEP51690 589 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 PDX1P52945 283 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 RPL26P61254 145 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 VAC14Q08AM6 782 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 GALNT2Q10471 571 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 ILF3Q12906 894 aaKnown RBP eCLIP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 CNGA3Q16281 694 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 IFI16Q16666 785 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 C14orf28Q4W4Y0 310 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 RAB11FIP2Q7L804 512 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 LUZP1Q86V48 1076 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 CCNJLQ8IV13 435 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 KCTD6Q8NC69 237 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 PIH1D2Q8WWB5 315 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 MAML1Q92585 1016 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 NAF1Q96HR8 494 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 LGR4Q9BXB1 951 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 GSDMCQ9BYG8 508 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 POLR1EQ9GZS1 481 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 TMEM168Q9H0V1 697 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 DPEP2Q9H4A9 486 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 LRIT1Q9P2V4 623 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 ACSL6Q9UKU0 697 aa12.18□□□□□ -0.46
GTF3C1-204ENST00000564664 RPL26L1Q9UNX3 145 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms