RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 RASGRP1O95267 797 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 TNFP01375 233 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 TRBC1P01850 177 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 C1SP09871 688 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 ALPIP09923 528 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 NUDT7P0C024 238 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 ZNF30P17039 623 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 CKMT2P17540 419 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 SPINK2P20155 84 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 HNF1BP35680 557 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 ATP5OP48047 213 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 DUSP3P51452 185 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 NIPAL4Q0D2K0 466 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 ZBTB17Q13105 803 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 NFATC4Q14934 902 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 PRRT3Q5FWE3 981 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 KDM7AQ6ZMT4 941 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 B4GALNT4Q76KP1 1039 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 PHACTR4Q8IZ21 702 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 OR4C6Q8NH72 309 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 CCHCR1Q8TD31 782 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 GLMNQ92990 594 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 WDR92Q96MX6 357 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 MCCC1Q96RQ3 725 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 SLC25A51Q9H1U9 297 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 WDR26Q9H7D7 661 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 PHPT1Q9NRX4 125 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 UCKL1Q9NWZ5 548 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 NLGN3Q9NZ94 848 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 KLHL8Q9P2G9 620 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-206ENST00000564557 KLQ9UEF7 1012 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 PPIL1Q9Y3C6 166 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 PCDHGA1Q9Y5H4 931 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 CSNK1G3Q9Y6M4 447 aa13.68□□□□□ -0.22
CNOT1-206ENST00000564557 GRID2IPA4D2P6 1211 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 NPIPB15A6NHN6 443 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 MIF4GDA9UHW6 222 aaKnown RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 ARHGAP6O43182 974 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 FZD6O60353 706 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 RFPL3O75679 317 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 TOP3BO95985 862 aaKnown RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 ANXA6P08133 673 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 PECAM1P16284 738 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 TSHRP16473 764 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 ETV3P41162 512 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 SKOR1P84550 965 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 EIF2B5Q13144 721 aaKnown RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 DNAJC3Q13217 504 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 ELOCQ15369 112 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 PCSK7Q16549 785 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 LRRC66Q68CR7 880 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 RAET1GQ6H3X3 334 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 ESRP1Q6NXG1 681 aaKnown RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 PNCKQ6P2M8 343 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 PID1Q7Z2X4 250 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 KANSL1Q7Z3B3 1105 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 KDELC2Q7Z4H8 507 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 TSPAN33Q86UF1 283 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 GALNT15Q8N3T1 639 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 FSTL5Q8N475 847 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 CNTD1Q8N815 330 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 PLA2G15Q8NCC3 412 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 ZNF548Q8NEK5 533 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 TSACCQ96A04 125 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-206ENST00000564557 DTD2Q96FN9 168 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 COQ10AQ96MF6 247 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 VAT1Q99536 393 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 GUCA1BQ9UMX6 200 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 EFR3BQ9Y2G0 817 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 NEUROG3Q9Y4Z2 214 aa13.67□□□□□ -0.22
CNOT1-206ENST00000564557 LRRK1Q38SD2 2015 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 C1orf232A0A0U1RR37 186 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 CAPN8A6NHC0 703 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 ANKRD66B4E2M5 251 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 APOC4-APOC2K7ER74 178 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 TRIM38O00635 465 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
CNOT1-206ENST00000564557 APOC2P02655 101 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 PYGLP06737 847 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 LHCGRP22888 699 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 PTPN3P26045 913 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 GPR1P46091 355 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 RPIAP49247 311 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 HK3P52790 923 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 KIAA1024LP59773 190 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
CNOT1-206ENST00000564557 ILKQ13418 452 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 XRCC4Q13426 336 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 C1orf61Q13536 156 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
CNOT1-206ENST00000564557 TPRG1LQ5T0D9 272 aa13.66□□□□□ -0.22
CNOT1-206ENST00000564557 CRTC1Q6UUV9 634 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms