RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CPOQ8IVL8 374 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 WDR63Q8IWG1 891 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 OR2AK2Q8NG84 335 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 FBXO17Q96EF6 278 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 RPS6KC1Q96S38 1066 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 PLEKHA5Q9HAU0 1116 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 PCDH9Q9HC56 1237 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 C20orf141Q9NUB4 165 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 MCM9Q9NXL9 1143 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 HSPB7Q9UBY9 170 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 POU2F3Q9UKI9 436 aa3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 LSM4Q9Y4Z0 139 aaKnown RBP3.26□□□□□ -1.89
HMGB1P33-201ENST00000563485 A0A1W2PS18 150 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 TMEM202A6NGA9 273 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 AKR1B15C9JRZ8 316 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 CAPN9O14815 690 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 MT-CYBP00156 380 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 AMBPP02760 352 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 FGF5P12034 268 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 SHMT1P34896 483 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 DDIT3P35638 169 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 PGM1P36871 562 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 FMO5P49326 533 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 RGS19P49795 217 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 CLCNKAP51800 687 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 CDH15P55291 814 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 LINC01547P58512 204 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 NFIL3Q16649 462 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 TCTN1Q2MV58 587 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 C2orf68Q2NKX9 166 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 HIST2H2BCQ6DN03 193 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 HIST2H2BDQ6DRA6 164 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 LCTLQ6UWM7 567 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 LDHAL6AQ6ZMR3 332 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 LINGO2Q7L985 606 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 ZNF34Q8IZ26 560 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 ZCCHC9Q8N567 271 aaKnown RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 ZBTB2Q8N680 514 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 C11orf65Q8NCR3 313 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 DMBX1Q8NFW5 382 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 PPM1EQ8WY54 764 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 ABTB1Q969K4 478 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 ALG14Q96F25 216 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 INTS2Q9H0H0 1204 aaKnown RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 TKTL2Q9H0I9 626 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 BPIFA1Q9NP55 256 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 TMEM30AQ9NV96 361 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 FBXO9Q9UK97 447 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 PADI1Q9ULC6 663 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 GPR52Q9Y2T5 361 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 AMDHD2Q9Y303 409 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 FAM96BQ9Y3D0 163 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 NOTCH3Q9UM47 2321 aa3.25□□□□□ -1.89
HMGB1P33-201ENST00000563485 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 FAM72CH0Y354 149 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 APOHP02749 345 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 TFP02787 698 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 SERPINB2P05120 415 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 MAOAP21397 527 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 CDKN1AP38936 164 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 USP8P40818 1118 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 ATP12AP54707 1039 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 HNRNPH2P55795 449 aaKnown RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 PITX1P78337 314 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 UBE3AQ05086 875 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 PPP2R5BQ15173 497 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 RNPS1Q15287 305 aaKnown RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 GRAMD1BQ3KR37 738 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC45A4Q5BKX6 768 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 STXBP5Q5T5C0 1151 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 FAM72AQ5TYM5 149 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 TXNDC8Q6A555 127 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 FAM72DQ6L9T8 149 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 CPLX2Q6PUV4 134 aaKnown RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 NFE4Q86UQ8 179 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 FAM72BQ86X60 149 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 KMT5CQ86Y97 462 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 C1orf87Q8N0U7 546 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 SLC24A4Q8NFF2 622 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 HUS1BQ8NHY5 278 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 MAGEC3Q8TD91 643 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 HERVK_113Q902F9 699 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 ZNF501Q96CX3 271 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 CDCA5Q96FF9 252 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 CMKLR1Q99788 373 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 ISCA1Q9BUE6 129 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 PPP1R3EQ9H7J1 279 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 RIC8AQ9NPQ8 531 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 GPR108Q9NPR9 543 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 BEX4Q9NWD9 120 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 CNOT7Q9UIV1 285 aaKnown RBP3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 TCF19Q9Y242 345 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 COMMD10Q9Y6G5 202 aa3.24□□□□□ -1.89
HMGB1P33-201ENST00000563485 EDIL3O43854 480 aa3.23□□□□□ -1.89
HMGB1P33-201ENST00000563485 PIP5K1CO60331 668 aa3.23□□□□□ -1.89
HMGB1P33-201ENST00000563485 MYOD1P15172 320 aa3.23□□□□□ -1.89
HMGB1P33-201ENST00000563485 GM2AP17900 193 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms