RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 HEXDCQ8WVB3 486 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 METTL2AQ96IZ6 378 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 CCDC115Q96NT0 180 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 TBC1D22BQ9NU19 505 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 AAR2Q9Y312 384 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 KANTRA0A1W2PQU2 76 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 AP3D1O14617 1153 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 COL6A2P12110 1019 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 OGNP20774 298 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 ATP5F1P24539 256 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 VARSP26640 1264 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 IFNGR2P38484 337 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RHEBQ15382 184 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 EPHX4Q8IUS5 362 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SLC37A3Q8NCC5 494 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MAELQ96JY0 434 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 LGR6Q9HBX8 967 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CDH7Q9ULB5 785 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CABYRO75952 493 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PGK2P07205 417 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RAP2AP10114 183 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 HOXD11P31277 338 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 SNTA1Q13424 505 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MED22Q15528 200 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 KBTBD6Q86V97 674 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 LACC1Q8IV20 430 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 FNDC5Q8NAU1 212 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 GANCQ8TET4 914 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 EIF2AK1Q9BQI3 630 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 FN3KQ9H479 309 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 NRBP2Q9NSY0 501 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 C10orf71Q711Q0 1435 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 BCLAF3A2AJT9 711 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 GSG1L2A8MUP6 293 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PPEF1O14829 653 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 CHRNA1P02708 482 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 TGFB3P10600 412 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ETFBP38117 255 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ALDH9A1P49189 494 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RPS3AP61247 264 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 COTL1Q14019 142 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 METTL4Q8N3J2 472 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 OR13J1Q8NGT2 312 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SLC35C1Q96A29 364 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 EGFL8Q99944 293 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 MTMR10Q9NXD2 777 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.26□□□□□ -1.41
CLK3-212ENST00000563418 INVSQ9Y283 1065 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DISC1C4P0D8 188 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 NT5C1B-RDH14C9J2C7 533 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 BMXP51813 675 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 NDST1P52848 882 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DAG1Q14118 895 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ARMC6Q6NXE6 501 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CADM2Q8N3J6 435 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SPATA6LQ8N4H0 392 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 OR6P1Q8NGX9 317 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ALG3Q92685 438 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 AZIN2Q96A70 460 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RIPOR3Q96MK2 946 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 GAD1Q99259 594 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 TSNAXQ99598 290 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 MED10Q9BTT4 135 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SLITRK2Q9H156 845 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ERVK-5Q9HDB9 667 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 HSPE1-MOB4S4R3N1 261 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RPL35P42766 123 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 ANXA11P50995 505 aaKnown RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 ZNF81P51508 661 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 DCDC1P59894 354 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 KCTD19Q17RG1 926 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ASTE1Q2TB18 679 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 OFCC1Q8IZS5 231 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SLC20A1Q8WUM9 679 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ACOT12Q8WYK0 555 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ELMO1Q92556 727 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 LPGAT1Q92604 370 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ZUFSPQ96AP4 578 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SLC45A3Q96JT2 553 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 LENG8Q96PV6 779 aaPredicted RBP6.26□□□□□ -1.41
CLK3-212ENST00000563418 DSN1Q9H410 356 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CASS4Q9NQ75 786 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 HCN3Q9P1Z3 774 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 UPB1Q9UBR1 384 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 STUB1Q9UNE7 303 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 ZNF175Q9Y473 711 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PRKAB2O43741 272 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RFPL1O75677 317 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 INMTO95050 263 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 EPHA3P29320 983 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 CAPZA2P47755 286 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PPP3CCP48454 512 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 RETREG3Q86VR2 466 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 PDZD9Q8IXQ8 264 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 OXR1Q8N573 874 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 METTL6Q8TCB7 284 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 GATAD2BQ8WXI9 593 aa6.26□□□□□ -1.41
CLK3-212ENST00000563418 SNAPC3Q92966 411 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms