RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 EIF3CQ99613 913 aaKnown RBP16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 ETNK2Q9NVF9 386 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 MOSPD1Q9UJG1 213 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 PCDHGC4Q9Y5F7 938 aa16.82■□□□□ 0.28
HDGFL3-203ENST00000563404 ARHGEF17Q96PE2 2063 aaPredicted RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 SLC28A2O43868 658 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 LRCH4O75427 683 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 FGF1P05230 155 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 CEACAM5P06731 702 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 MYCLP1P12525 358 aaPredicted RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 CCNB1P14635 433 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 DESP17661 470 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 CR2P20023 1033 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 CDK11BP21127 795 aaKnown RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 LHCGRP22888 699 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 HCAR3P49019 387 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 OR1D5P58170 312 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 ARHGEF7Q14155 803 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 SKOR2Q2VWA4 1001 aaPredicted RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF574Q6ZN55 896 aaPredicted RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 USP53Q70EK8 1073 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 HSD11B1LQ7Z5J1 315 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 SPOCK2Q92563 424 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 EXTL1Q92935 676 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 NUS1Q96E22 293 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 SGF29Q96ES7 293 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 SUDS3Q9H7L9 328 aaPredicted RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 CARS2Q9HA77 564 aaKnown RBP16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 RDH14Q9HBH5 336 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 ANO10Q9NW15 660 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 SEPT3Q9UH03 358 aa16.81■□□□□ 0.28
HDGFL3-203ENST00000563404 LRRC53A6NM62 1247 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 CYSRT1A8MQ03 144 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 PRPSAP2O60256 369 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 HEXIM1O94992 359 aaKnown RBP16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 CCDC172P0C7W6 258 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 TCF4P15884 667 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 AK4P27144 223 aaPredicted RBP16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 IL1R2P27930 398 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 ETV3P41162 512 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 MAPK10P53779 464 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 STX1AQ16623 288 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 PHF19Q5T6S3 580 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 TMCO4Q5TGY1 634 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF438Q7Z4V0 828 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 HEATR4Q86WZ0 1026 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 DTX1Q86Y01 620 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 PSTKQ8IV42 348 aaKnown RBP16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 PAF1Q8N7H5 531 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 FNIP1Q8TF40 1166 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 ZDHHC1Q8WTX9 485 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 PATE1Q8WXA2 126 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 TMEM159Q96B96 161 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 ZNF599Q96NL3 588 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 CMKLR1Q99788 373 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 NUDT22Q9BRQ3 303 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 TEX101Q9BY14 249 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 FRMD8Q9BZ67 464 aaPredicted RBP16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 HAUS4Q9H6D7 363 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 NOD2Q9HC29 1040 aa16.8■□□□□ 0.28
HDGFL3-203ENST00000563404 A0A0U1RQS6 177 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 RNF8O76064 485 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 FTLP02792 175 aaPredicted RBP16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 CCL4P13236 92 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 AMPD1P23109 780 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 VIPR1P32241 457 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 POLD2P49005 469 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 RENBPP51606 427 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 ARSDP51689 593 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 TRAF2Q12933 501 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 NFATC3Q12968 1075 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 NR1D2Q14995 579 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 AMZ1Q400G9 498 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 DENND2CQ68D51 928 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 AOPEPQ8N6M6 819 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 PDCD6IPQ8WUM4 868 aaKnown RBP16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 PMEPA1Q969W9 287 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 DTD2Q96FN9 168 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 NUDCD1Q96RS6 583 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 TAAR2Q9P1P5 351 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 CNOT8Q9UFF9 292 aaKnown RBP16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 MYO6Q9UM54 1294 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 SUFUQ9UMX1 484 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
HDGFL3-203ENST00000563404 NPIPB15A6NHN6 443 aaPredicted RBP16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 PDE2AO00408 941 aaPredicted RBP16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 MAFKO60675 156 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 SOCS5O75159 536 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 ECEL1O95672 775 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 CPNE6O95741 557 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 CPP00450 1065 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 ITGB6P18564 788 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 ALDH4A1P30038 563 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 GNPDA1P46926 289 aa16.78■□□□□ 0.28
HDGFL3-203ENST00000563404 MAXP61244 160 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms