RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ARHGAP10A1A4S6 786 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CDC14CA4D256 554 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CFAP69A5D8W1 941 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 GOLGA6L3A6NEY3 463 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 A8MU76 341 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 ZW10O43264 779 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 SRGAP2O75044 1071 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CREG1O75629 220 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CEACAM4O75871 244 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 RECQL5O94762 991 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 LETM1O95202 739 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PIGNO95427 931 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CEACAM5P06731 702 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PFKFB1P16118 471 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 KELP23276 732 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 MAN1A1P33908 653 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 FASLGP48023 281 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 LEPRP48357 1165 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PGDP52209 483 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PMS1P54277 932 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC6A3Q01959 620 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 LAMB3Q13751 1172 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 NR6A1Q15406 480 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 MANEALQ5VSG8 457 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 TRNP1Q6NT89 227 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 WDR74Q6RFH5 385 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 C11orf57Q6ZUT1 292 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 ZNF761Q86XN6 746 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 TP53INP2Q8IXH6 220 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 RBMXL3Q8N7X1 1067 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 RNF31Q96EP0 1072 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 GDAP1L1Q96MZ0 367 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 TBCBQ99426 244 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC25A23Q9BV35 468 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 GSDMCQ9BYG8 508 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 FRMD8Q9BZ67 464 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 CARS2Q9HA77 564 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 TRNAU1APQ9NX07 287 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 LUZP4Q9P127 313 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PPARGC1AQ9UBK2 798 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 LHX3Q9UBR4 397 aa7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 ARMCX3Q9UH62 379 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-206ENST00000563343 PIKFYVEQ9Y2I7 2098 aa7.71□□□□□ -1.17
HERPUD1-206ENST00000563343 NUP210LQ5VU65 1888 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 A0A1B0GVL5 298 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 BECN2A8MW95 431 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 POLR1CO15160 346 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 MED7O43513 233 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 KDELR3O43731 214 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 KRT86O43790 486 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 BUB1BO60566 1050 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 IGSF6O95976 241 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 MYCLP1P12525 358 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 GNA15P30679 374 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 ETFBP38117 255 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 ME1P48163 572 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SULT1E1P49888 294 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 GEMIN4P57678 1058 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 FKBP3Q00688 224 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 CTBSQ01459 385 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 NRG1Q02297 640 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 DEUP1Q05D60 604 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 ILF3Q12906 894 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 RAPGEF1Q13905 1077 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 TESK1Q15569 626 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 PTPN20Q4JDL3 420 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 ZRANB3Q5FWF4 1079 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SNAP47Q5SQN1 464 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 ACBD5Q5T8D3 534 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC6A19Q695T7 634 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 PNCKQ6P2M8 343 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC30A9Q6PML9 568 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 C6orf15Q6UXA7 325 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 LIPIQ6XZB0 460 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC47A2Q86VL8 602 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 MCEMP1Q8IX19 187 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 GALNT6Q8NCL4 622 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SNRNP40Q96DI7 357 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 INTS4Q96HW7 963 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 RUFY1Q96T51 708 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 TEX101Q9BY14 249 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 TWSG1Q9GZX9 223 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 KLC2Q9H0B6 622 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SUV39H2Q9H5I1 410 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 NOL6Q9H6R4 1146 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 WDR26Q9H7D7 661 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 UPF2Q9HAU5 1272 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 TMEM248Q9NWD8 314 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 RRN3Q9NYV6 651 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 USP25Q9UHP3 1055 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 DNAI1Q9UI46 699 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 MOSPD1Q9UJG1 213 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 SUFUQ9UMX1 484 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 ATP8A1Q9Y2Q0 1164 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 PLEKHM1Q9Y4G2 1056 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 DNHD1Q96M86 4753 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms