RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MCM8Q9UJA3 840 aa9.82□□□□□ -0.84
SMG1-205ENST00000561947 MAFFQ9ULX9 164 aa9.82□□□□□ -0.84
SMG1-205ENST00000561947 MTF2Q9Y483 593 aaPredicted RBP9.82□□□□□ -0.84
SMG1-205ENST00000561947 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 C2orf81A6NN90 581 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 GFRA2O00451 464 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 SLC22A2O15244 555 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 GREM1O60565 184 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 JUNP05412 331 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 PDHA1P08559 390 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 CD1DP15813 335 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 MZF1P28698 734 aaPredicted RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 PMLP29590 882 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 WDR5P61964 334 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 RCN1Q15293 331 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 PDCD2Q16342 344 aaPredicted RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 SH2D4BQ5SQS7 431 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 LINGO4Q6UY18 593 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 ISCA2Q86U28 154 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 CPSF7Q8N684 471 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 ARL14EPQ8N8R7 260 aaPredicted RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 OR4K2Q8NGD2 314 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 STMN2Q93045 179 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 ZNF385DQ9H6B1 395 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 ALG9Q9H6U8 611 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 EML4Q9HC35 981 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMG1-205ENST00000561947 LHX3Q9UBR4 397 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 PCDHGC4Q9Y5F7 938 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 PTPRSQ13332 1948 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 A0A088AWK7 358 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 TYW5A2RUC4 315 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 TRPC5OSA6NMA1 111 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 TMEM233B4DJY2 109 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 SCAMP3O14828 347 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 TEX28O15482 410 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 LUC7L3O95232 432 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 PENKP01210 267 aaPredicted RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 PRSS56P0CW18 603 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 HNRNPLP14866 589 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMG1-205ENST00000561947 SP100P23497 879 aaPredicted RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 PIK3R1P27986 724 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 CDC25CP30307 473 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 SULT2A1Q06520 285 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 TRAF2Q12933 501 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 PABPC1LQ4VXU2 614 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 INO80DQ53TQ3 878 aaPredicted RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 TXNDC8Q6A555 127 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 NCEH1Q6PIU2 408 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 Q6ZNB5 142 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 RIPOR1Q6ZS17 1223 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 FRMD7Q6ZUT3 714 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 MAELQ96JY0 434 aaKnown RBP9.81□□□□□ -0.84
SMG1-205ENST00000561947 FAR2Q96K12 515 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 SMIM14Q96QK8 99 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 PANX3Q96QZ0 392 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 FEM1AQ9BSK4 669 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 ADGRE3Q9BY15 652 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 SSX2IPQ9Y2D8 614 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 OR51B4Q9Y5P0 310 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 CPQQ9Y646 472 aa9.81□□□□□ -0.84
SMG1-205ENST00000561947 LOC100653049A0A140TA62 436 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 KRT34O76011 436 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ZNF37AP17032 561 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 HDCP19113 662 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ITGAXP20702 1163 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 LPOP22079 712 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 ADSLP30566 484 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 PPARGP37231 505 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 PLK1P53350 603 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 NFKB2Q00653 900 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 GALNT1Q10472 559 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 CUL3Q13618 768 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 RALGPS1Q5JS13 557 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 TLDC1Q6P9B6 456 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 FAM217AQ8IXS0 508 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMG1-205ENST00000561947 AFAP1L2Q8N4X5 818 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 LPGAT1Q92604 370 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 PTERQ96BW5 349 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 PHF21BQ96EK2 531 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 L3HYPDHQ96EM0 354 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ANKRD27Q96NW4 1050 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 LENG8Q96PV6 779 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 RTKNQ9BST9 563 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ZBED2Q9BTP6 218 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 STOML1Q9UBI4 398 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 VPS28Q9UK41 221 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 ARHGAP26Q9UNA1 814 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 UBA6A0AVT1 1052 aaPredicted RBP9.8□□□□□ -0.84
SMG1-205ENST00000561947 ANKRD66B4E2M5 251 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 SDHDO14521 159 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 LILRB3O75022 631 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 EFCAB14O75071 495 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 SMIM24O75264 130 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 IMPDH1P20839 514 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 PPM1AP35813 382 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 CSKP41240 450 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 KCNC1P48547 511 aa9.8□□□□□ -0.84
SMG1-205ENST00000561947 PTDSS1P48651 473 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms