RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 GLIS1Q8NBF1 620 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TXNDC5Q8NBS9 432 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 SMG8Q8ND04 991 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 OR5H6Q8NGV6 325 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 FIG4Q92562 907 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 RPL3LQ92901 407 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 SH3KBP1Q96B97 665 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TOE1Q96GM8 510 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 ST6GAL2Q96JF0 529 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ELMO2Q96JJ3 720 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 RNF170Q96K19 258 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 MAGEB10Q96LZ2 347 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 NT5C1BQ96P26 610 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TMEM47Q9BQJ4 181 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 MECRQ9BV79 373 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TARS2Q9BW92 718 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 ASPSCR1Q9BZE9 553 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ZNF518BQ9C0D4 1074 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TMEM117Q9H0C3 514 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 GREM2Q9H772 168 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 RRAGCQ9HB90 399 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 SPC25Q9HBM1 224 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PRDM8Q9NQV8 689 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 XPNPEP1Q9NQW7 623 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PNPOQ9NVS9 261 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 MARCOQ9UEW3 520 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 GTF2IRD1Q9UHL9 959 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 OSGIN1Q9UJX0 560 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CNOT6Q9ULM6 557 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 RWDD3Q9Y3V2 267 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 COPG1Q9Y678 874 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 RBBP6Q7Z6E9 1792 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 TMEM191CA6NGB0 347 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TUBAL3A6NHL2 446 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 AGAP5A6NIR3 686 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 FAM170BA6NMN3 283 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 H0YIN7 160 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CYB561D2O14569 222 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CLIC2O15247 247 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 NCAM2O15394 837 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SYNCRIPO60506 623 aaKnown RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 TRIM13O60858 407 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 ENTPD3O75355 529 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 MED24O75448 989 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SERPINI2O75830 405 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SNAPC5O75971 98 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 OR7A10O76100 309 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 PRKD3O94806 890 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 DDHD2O94830 711 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 MAP3K6O95382 1288 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 MED26O95402 600 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SEC24AO95486 1093 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 FOSP01100 380 aaPredicted RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 CHRNA1P02708 482 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 MPOP05164 745 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CALB1P05937 261 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TMEM191BP0C7N4 346 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SUPT20HL2P0C7V6 817 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 ZSCAN5DPP0CG00 497 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SPATA31C1P0DKV0 1188 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 IL7P13232 177 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 GLULP15104 373 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TPSB2P20231 275 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CYP2A7P20853 494 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 PSMA4P25789 261 aaKnown RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 HLA-DMAP28067 261 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 WEE1P30291 646 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 HTR7P34969 479 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TRIM23P36406 574 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 GARSP41250 739 aaKnown RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 MAGEA3P43357 314 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 MAGEA11P43364 429 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 RPL14P50914 215 aaKnown RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 AP1S2P56377 157 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 RAB25P57735 213 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 OR2B6P58173 313 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TAS2R40P59535 323 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CSNK2BP67870 215 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TNK2Q07912 1038 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 AQP6Q13520 282 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 RIN1Q13671 783 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 ANGPT1Q15389 498 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 TPSAB1Q15661 275 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 NEDD8Q15843 81 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 KCTD19Q17RG1 926 aaPredicted RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 ZC3H12BQ5HYM0 836 aaKnown RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 TOR1AIP1Q5JTV8 583 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CLVS2Q5SYC1 327 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SYT6Q5T7P8 510 aaPredicted RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 SEL1L3Q68CR1 1132 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 DCUN1D2Q6PH85 259 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 MFSD7Q6UXD7 560 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 ZNF782Q6ZMW2 699 aaPredicted RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 C1orf186Q6ZWK4 172 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 CCDC103Q8IW40 242 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 SAMD14Q8IZD0 417 aaPredicted RBP7.27□□□□□ -1.25
CDH1-203ENST00000561751 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.25
CDH1-203ENST00000561751 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms