RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 NPAS3Q8IXF0 933 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 C4orf33Q8N1A6 199 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 DNASE1L2Q92874 299 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 IRF7Q92985 503 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 RSPRY1Q96DX4 576 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 MFSD3Q96ES6 412 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 EXOC2Q96KP1 924 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 ZNF778Q96MU6 729 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 SMC6Q96SB8 1091 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 BBS2Q9BXC9 721 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 ARRDC1-AS1Q9H2J1 176 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 LINC00597Q9H2U6 94 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 TRPV4Q9HBA0 871 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 SPHK2Q9NRA0 654 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 TREX1Q9NSU2 369 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 C20orf96Q9NUD7 363 aaPredicted RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 ABCB8Q9NUT2 735 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 IL1RAPL1Q9NZN1 696 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 GGA2Q9UJY4 613 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 INTS6Q9UL03 887 aaKnown RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 WASF3Q9UPY6 502 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 PSAT1Q9Y617 370 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 WNT6Q9Y6F9 365 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 TNRC6BQ9UPQ9 1833 aaKnown RBP7.56□□□□□ -1.2
TPM1-231ENST00000561395 CEP192Q8TEP8 1941 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 ADAMTS9Q9P2N4 1935 aa7.56□□□□□ -1.2
TPM1-231ENST00000561395 FREM2Q5SZK8 3169 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 HMX2A2RU54 273 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 MROH6A6NGR9 719 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 K7ERQ8 282 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 GIPC1O14908 333 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 AXIN1O15169 862 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SMAD6O43541 496 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 TYROBPO43914 113 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SPAG7O75391 227 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 PAPSS2O95340 614 aaPredicted RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 TOP3BO95985 862 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 MT-CO1P00395 513 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 MT-ND3P03897 115 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CYP17A1P05093 508 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 PABPC1P11940 636 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 TYRP14679 529 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 KRT4P19013 534 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 PAMP19021 973 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CA4P22748 312 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 ARNTP27540 789 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 GP5P40197 560 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CCNFP41002 786 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CXCL12P48061 93 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 ARCN1P48444 511 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 SLC18A1P54219 525 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 AP1S1P61966 158 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 PPARDQ03181 441 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SLC18A2Q05940 514 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SLC20A2Q08357 652 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 LAMB3Q13751 1172 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 BMPR2Q13873 1038 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 MPP2Q14168 576 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 GALNT3Q14435 633 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 DMC1Q14565 340 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SMAD1Q15797 465 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 HSP90AA5PQ58FG0 334 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 PITRM1Q5JRX3 1037 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 FAM78AQ5JUQ0 283 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 LY6G5CQ5SRR4 150 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 TSTD2Q5T7W7 516 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 TEDDM1Q5T9Z0 273 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 GRTP1Q5TC63 336 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 RETSATQ6NUM9 610 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 ESRP1Q6NXG1 681 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 NCEH1Q6PIU2 408 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 TIFABQ6ZNK6 161 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SH2D5Q6ZV89 423 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 NLRP9Q7RTR0 991 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 LONP2Q86WA8 852 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CNTN4Q8IWV2 1026 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.2
TPM1-231ENST00000561395 OSCP1Q8WVF1 389 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SMARCD2Q92925 531 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 ALKBH8Q96BT7 664 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 APOPT1Q96IL0 206 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SERAC1Q96JX3 654 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 ASB16Q96NS5 453 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 LRRC3BQ96PB8 259 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 AGAP2Q99490 1192 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CPNE1Q99829 537 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 MCMBPQ9BTE3 642 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 TDRD1Q9BXT4 1180 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 PLA2G2FQ9BZM2 168 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 CCDC134Q9H6E4 229 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 LMAN1LQ9HAT1 526 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 KCNK9Q9NPC2 374 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 INTS9Q9NV88 658 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 DUS2Q9NX74 493 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 MKS1Q9NXB0 559 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 NSMCE4AQ9NXX6 385 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 NKIRAS1Q9NYS0 192 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 GDE1Q9NZC3 331 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms