RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DPTQ07507 201 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SEMA5AQ13591 1074 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ARHGEF7Q14155 803 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 GALNT3Q14435 633 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 LRRC14Q15048 493 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 PCSK7Q16549 785 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 WSCD2Q2TBF2 565 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TRIM61Q5EBN2 209 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SIRPB2Q5JXA9 342 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 DENND5AQ6IQ26 1287 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ESRP1Q6NXG1 681 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TTC27Q6P3X3 843 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 CCDC137Q6PK04 289 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SYT10Q6XYQ8 523 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 GCNT7Q6ZNI0 430 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 PRR23CQ6ZRP0 262 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ZNF765Q7L2R6 523 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TMC3Q7Z5M5 1100 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TSPAN33Q86UF1 283 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 NRSN1Q8IZ57 195 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 KLK6Q92876 244 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SKA1Q96BD8 255 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 LRRC45Q96CN5 670 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 DTD2Q96FN9 168 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SLC6A18Q96N87 628 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 AP1M1Q9BXS5 423 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 NUSAP1Q9BXS6 441 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 MIR1-1HGQ9H1L0 117 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TRABDQ9H4I3 376 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ERVMER34-1Q9H9K5 563 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 HACD3Q9P035 362 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 NFKBIL1Q9UBC1 381 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 NEU2Q9Y3R4 380 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 LNP1A1A4G5 178 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 POM121BA6NF01 834 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 A6NNZ2 444 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CCDC188H7C350 402 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 KIF2AO00139 706 aaPredicted RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 TLR4O00206 839 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 FPGTO14772 594 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 DFNA5O60443 496 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CLDN7O95471 211 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 AGTP01019 485 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 IFNB1P01574 187 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 SYPP08247 313 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 ZNF883P0CG24 379 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 IGFALSP35858 605 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 HMGCLP35914 325 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 PAFAH1B1P43034 410 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CTSKP43235 329 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 MAGEA6P43360 314 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CHRNA4P43681 627 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 TNNT3P45378 269 aaPredicted RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 RABIFP47224 123 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CSNK1EP49674 416 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 LIMK1P53667 647 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CDK16Q00536 496 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 SEMG2Q02383 582 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 MTM1Q13496 603 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 PTPRRQ15256 657 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 ZNF423Q2M1K9 1284 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 LRRC66Q68CR7 880 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 IL27RAQ6UWB1 636 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 KYAT3Q6YP21 454 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 Q6ZVL8 140 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 HSD11B1LQ7Z5J1 315 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 IPMKQ8NFU5 416 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 DTX3LQ8TDB6 740 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 GRK7Q8WTQ7 553 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 EID2BQ96D98 161 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 KLHDC7BQ96G42 594 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 RUNDC3BQ96NL0 473 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 SMIM14Q96QK8 99 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 FSD1LQ9BXM9 530 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 CDH19Q9H159 772 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 LRRC40Q9H9A6 602 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 ZFYVE1Q9HBF4 777 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 EIF2B3Q9NR50 452 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 MBNL1Q9NR56 388 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 AASDHPPTQ9NRN7 309 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 SMARCAL1Q9NZC9 954 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 COQ6Q9Y2Z9 468 aa9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 COL5A1P20908 1838 aaPredicted RBP9.63□□□□□ -0.87
RABGGTA-221ENST00000561055 C1orf232A0A0U1RR37 186 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 A8MX80 341 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 H0Y8X5 98 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 PDE2AO00408 941 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 CDX4O14627 284 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 PPFIA2O75334 1257 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 CFIP05156 583 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 C1SP09871 688 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ZSCAN5DPP0CG00 497 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ETS1P14921 441 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 ENGP17813 658 aa9.62□□□□□ -0.87
RABGGTA-221ENST00000561055 PSMA3P25788 255 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms