RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LIG3P49916 1009 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 RPS15P62841 145 aaKnown RBP9.54□□□□□ -0.88
HERC1-210ENST00000560897 AGERQ15109 404 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 NFIL3Q16649 462 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 ATXN7L2Q5T6C5 722 aaPredicted RBP9.54□□□□□ -0.88
HERC1-210ENST00000560897 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
HERC1-210ENST00000560897 SYVN1Q86TM6 617 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 CDH24Q86UP0 819 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 XYLT1Q86Y38 959 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 CEP57L1Q8IYX8 460 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 NAGSQ8N159 534 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 PAF1Q8N7H5 531 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 PLA2G15Q8NCC3 412 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 ST6GALNAC3Q8NDV1 305 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 CT55Q8WUE5 264 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 TMX3Q96JJ7 454 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 RANBP9Q96S59 729 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
HERC1-210ENST00000560897 TKTL2Q9H0I9 626 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 WDCPQ9H6R7 721 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 CHST11Q9NPF2 352 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 TRNAU1APQ9NX07 287 aaKnown RBP9.54□□□□□ -0.88
HERC1-210ENST00000560897 GPR83Q9NYM4 423 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 OSGIN2Q9Y236 505 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 ACTL7AQ9Y615 435 aa9.54□□□□□ -0.88
HERC1-210ENST00000560897 COPG1Q9Y678 874 aaKnown RBP9.54□□□□□ -0.88
HERC1-210ENST00000560897 CXorf51AA0A1B0GTR3 108 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 A0A1B0GUH1 482 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 SRGAP2O75044 1071 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 GRAP2O75791 330 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 FAM155BO75949 473 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 GLI1P08151 1106 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 BPIP17213 487 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 CAPN3P20807 821 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 SSTR2P30874 369 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 ACTR1BP42025 376 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 GPD2P43304 727 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 ACTR1AP61163 376 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 ART3Q13508 389 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 VWA2Q5GFL6 755 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 BRMS1LQ5PSV4 323 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 LYPLAL1Q5VWZ2 237 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 FAM173BQ6P4H8 233 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 CYB5D1Q6P9G0 228 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 ZNF354CQ86Y25 554 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 NRROSQ86YC3 692 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 DRC7Q8IY82 874 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 UBR7Q8N806 425 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 FDCSPQ8NFU4 85 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 CCDC47Q96A33 483 aaKnown RBP9.53□□□□□ -0.88
HERC1-210ENST00000560897 ELMO2Q96JJ3 720 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 NT5C1BQ96P26 610 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 SLC2A13Q96QE2 648 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 USP28Q96RU2 1077 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 GPR87Q9BY21 358 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 LHX9Q9NQ69 397 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 PHPT1Q9NRX4 125 aaPredicted RBP9.53□□□□□ -0.88
HERC1-210ENST00000560897 ARHGEF38Q9NXL2 777 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 B3GNT3Q9Y2A9 372 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 KLF2Q9Y5W3 355 aaPredicted RBP9.53□□□□□ -0.88
HERC1-210ENST00000560897 DOCK4Q8N1I0 1966 aa9.53□□□□□ -0.88
HERC1-210ENST00000560897 ZGRF1Q86YA3 2104 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 A6NL46 340 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 DRGXA6NNA5 263 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 F5H423 210 aaPredicted RBP9.52□□□□□ -0.89
HERC1-210ENST00000560897 ZNF185O15231 689 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 THAP12O43422 761 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 MED7O43513 233 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 PLEKP08567 350 aaPredicted RBP9.52□□□□□ -0.89
HERC1-210ENST00000560897 ELFN1P0C7U0 828 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 MYCLP1P12525 358 aaPredicted RBP9.52□□□□□ -0.89
HERC1-210ENST00000560897 PTPN4P29074 926 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 FASLGP48023 281 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 GLRBP48167 497 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 RHOAP61586 193 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 CTBSQ01459 385 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 PTK2Q05397 1052 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 IL11RAQ14626 422 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 TAF5Q15542 800 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 UGP2Q16851 508 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 FJX1Q86VR8 437 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 PLXDC1Q8IUK5 500 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 PPM1KQ8N3J5 372 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 GLIS1Q8NBF1 620 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 STK32AQ8WU08 396 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 SH3KBP1Q96B97 665 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 OR6C1Q96RD1 312 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 NUDT9Q9BW91 350 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 ZYG11BQ9C0D3 744 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 ASNSD1Q9NWL6 643 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 USP25Q9UHP3 1055 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 SUFUQ9UMX1 484 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 SNX10Q9Y5X0 201 aa9.52□□□□□ -0.89
HERC1-210ENST00000560897 FER1L5A0AVI2 2057 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms