RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 NME1P15531 152 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 CA4P22748 312 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 DGKAP23743 735 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 NFKBIAP25963 317 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 ETV3P41162 512 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 STC1P52823 247 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 ACOX1Q15067 660 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 TRIP6Q15654 476 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 CCDC181Q5TID7 509 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 LRRC66Q68CR7 880 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 ESRP1Q6NXG1 681 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 PID1Q7Z2X4 250 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 LPCAT1Q8NF37 534 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 OXNAD1Q96HP4 312 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 FCRL5Q96RD9 977 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 GORASP1Q9BQQ3 440 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 UCKL1Q9NWZ5 548 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 TRHDEQ9UKU6 1024 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 LOC285095A0A1B0GVY8 99 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 SDC3O75056 442 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 CLDN7O95471 211 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 PCCBP05166 539 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 HOXC4P09017 264 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 ZNF30P17039 623 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 EPHB1P54762 984 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 CDK18Q07002 472 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 ARHGEF7Q14155 803 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 GALNT3Q14435 633 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 KCTD16Q68DU8 428 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 PNCKQ6P2M8 343 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 MACC1Q6ZN28 852 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 PARGQ86W56 976 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 REXO1L1PQ8IX06 675 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 NDUFAF2Q8N183 169 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 SLC35B2Q8TB61 432 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 EID2BQ96D98 161 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 MLPHQ9BV36 600 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 TLR10Q9BXR5 811 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 TCEAL2Q9H3H9 227 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 DNAJC28Q9NX36 388 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 TOR4AQ9NXH8 423 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 UBP1Q9NZI7 540 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 KLHL8Q9P2G9 620 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 FAM153AQ9UHL3 310 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 WASF3Q9UPY6 502 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 OR1A2Q9Y585 309 aa15.27■□□□□ 0.04
SNRPA1-213ENST00000560856 TRIM38O00635 465 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 NRDCO43847 1150 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 PMPCBO75439 489 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 DKK1O94907 266 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 NDST3O95803 873 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 SOD1P00441 154 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 KCNA4P22459 653 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 PMLP29590 882 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 THOP1P52888 689 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 WNT3AP56704 352 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 SIM1P81133 766 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 DPTQ07507 201 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 PTK2BQ14289 1009 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 NFATC4Q14934 902 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 PCSK7Q16549 785 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 DENND2CQ68D51 928 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 DARS2Q6PI48 645 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 KDELC2Q7Z4H8 507 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 SLCO6A1Q86UG4 719 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 NLRP8Q86W28 1048 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 CDKL3Q8IVW4 592 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 RAVER1Q8IY67 606 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 TTC13Q8NBP0 860 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 NUS1Q96E22 293 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 MRGPRX2Q96LB1 330 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 WDR24Q96S15 920 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 CDC6Q99741 560 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 LGR4Q9BXB1 951 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 ADGRE3Q9BY15 652 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 ABCG8Q9H221 673 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 KCTD5Q9NXV2 234 aa15.26■□□□□ 0.03
SNRPA1-213ENST00000560856 F5H423 210 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 KCNN4O15554 427 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 EPOP01588 193 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 ATXN1LP0C7T5 689 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 JUNDP17535 347 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 TEAD1P28347 426 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 KIAA1024LP59773 190 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 HNRNPKP61978 463 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 FOXK2Q01167 660 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 ALG11Q2TAA5 492 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 ANKRD20A2Q5SQ80 823 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 ANKRD20A1Q5TYW2 823 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 ANKRD20A3Q5VUR7 823 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 ZNF765Q7L2R6 523 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 SLC13A5Q86YT5 568 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 KLHDC8BQ8IXV7 354 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 RBFAQ8N0V3 343 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 EID2Q8N6I1 236 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 TRIM58Q8NG06 486 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 SCAMP4Q969E2 229 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 TEX101Q9BY14 249 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms