RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754		J3QKU1	62 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	MAFK	O60675	156 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SOCS5	O75159	536 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	FGF1	P05230	155 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	HGF	P14210	728 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	CCNB1	P14635	433 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	IL1R2	P27930	398 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	TEAD1	P28347	426 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	HSPA9	P38646	679 aa	Known RBP	13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SQSTM1	Q13501	440 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	ACOX1	Q15067	660 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	DPYSL2	Q16555	572 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	TSR1	Q2NL82	804 aa	Known RBP	13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	RALGPS1	Q5JS13	557 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SPECC1L	Q69YQ0	1117 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	TMPRSS9	Q7Z410	1059 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	ZNF438	Q7Z4V0	828 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	POLN	Q7Z5Q5	900 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SLITRK4	Q8IW52	837 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	PGBD5	Q8N414	524 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SCRN2	Q96FV2	425 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	NUDCD1	Q96RS6	583 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	BPIFA3	Q9BQP9	254 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	DPEP2	Q9H4A9	486 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	WDR26	Q9H7D7	661 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SYNDIG1	Q9H7V2	258 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	ZWILCH	Q9H900	591 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	NOD2	Q9HC29	1040 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	MRPL47	Q9HD33	250 aa	Known RBP	13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	B4GALT6	Q9UBX8	382 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	CNOT8	Q9UFF9	292 aa	Known RBP	13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	PHTF1	Q9UMS5	762 aa		13.66	□□□□□ -0.22
RNF31-223	ENST00000560754	SPTA1	P02549	2419 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754		A0A1W2PQC6	194 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	PSMD11	O00231	422 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	HEXIM1	O94992	359 aa	Known RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	MYCLP1	P12525	358 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	AMPD1	P23109	780 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	DPT	Q07507	201 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	ARHGEF7	Q14155	803 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	NR1D2	Q14995	579 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	TGIF1	Q15583	401 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	CNGA3	Q16281	694 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	CLPP	Q16740	277 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	ZSCAN23	Q3MJ62	389 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	LINC00303	Q3SY05	128 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	E4F1	Q66K89	784 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	NLRP8	Q86W28	1048 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	DTX1	Q86Y01	620 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	AOPEP	Q8N6M6	819 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	EXD3	Q8N9H8	876 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	SCARF2	Q96GP6	870 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	CMKLR1	Q99788	373 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	ETNK2	Q9NVF9	386 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	LOXL2	Q9Y4K0	774 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	ST14	Q9Y5Y6	855 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	SCIN	Q9Y6U3	715 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	MAST4	O15021	2626 aa		13.65	□□□□□ -0.22
RNF31-223	ENST00000560754	SDK2	Q58EX2	2172 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	CPNE6	O95741	557 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	JMJD7	P0C870	316 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	MYBL1	P10243	752 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	RARA	P10276	462 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	LIPC	P11150	499 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	IL4R	P24394	825 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	VIPR1	P32241	457 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	GPR3	P46089	330 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	TYRO3	Q06418	890 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	NR1I3	Q14994	352 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	ASIC2	Q16515	512 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	HSD11B1L	Q7Z5J1	315 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	TECPR1	Q7Z6L1	1165 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	PIM3	Q86V86	326 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	LRRC49	Q8IUZ0	686 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	TEX26	Q8N6G2	289 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	KIAA1524	Q8TCG1	905 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	PIH1D2	Q8WWB5	315 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	NUS1	Q96E22	293 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	GBP4	Q96PP9	640 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	MGME1	Q9BQP7	344 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	NAT10	Q9H0A0	1025 aa	Known RBP	13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	SEMA6C	Q9H3T2	930 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	PISD	Q9UG56	409 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754	SLC17A4	Q9Y2C5	497 aa		13.64	□□□□□ -0.23
RNF31-223	ENST00000560754		H3BRJ5	948 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	FZD6	O60353	706 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	ITGB2	P05107	769 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	SKIL	P12757	684 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	TCF4	P15884	667 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	ITIH1	P19827	911 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	LHCGR	P22888	699 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	NFKBIA	P25963	317 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms