RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CYTH1Q15438 398 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 CCDC14Q49A88 953 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 RAB6CQ53S08 254 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 FHL5Q5TD97 284 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 NAA35Q5VZE5 725 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 PNCKQ6P2M8 343 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 TMEM71Q6P5X7 295 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 CEACAM20Q6UY09 585 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 LIPIQ6XZB0 460 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 STRADAQ7RTN6 431 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 KLC2Q9H0B6 622 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 RAB6CQ9H0N0 254 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 TRIT1Q9H3H1 467 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 CATSPERBQ9H7T0 1116 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 TRNAU1APQ9NX07 287 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 TP53TG5Q9Y2B4 290 aa17.84■□□□□ 0.45
TSPAN3-208ENST00000560514 IGHV1OR21-1A0A087WYE8 117 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 LOC101059948A0A1B0GTJ6 334 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 MKRN2OSH3BPM6 223 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 KRT7P08729 469 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 AK4P27144 223 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 ERCC5P28715 1186 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 OAS2P29728 719 aaKnown RBP17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 MLLT10P55197 1068 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 ABHD18Q0P651 414 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 UNC5BQ8IZJ1 945 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 CCDC185Q8N715 623 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 EFCAB3Q8N7B9 438 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 STARD8Q92502 1023 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 RTP4Q96DX8 246 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 ZPBPQ9BS86 351 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 MAGEB5Q9BZ81 275 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 NOL6Q9H6R4 1146 aaKnown RBP17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 SIX2Q9NPC8 291 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 NEU3Q9UQ49 428 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 KCTD3Q9Y597 815 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 PCDHB3Q9Y5E6 796 aa17.83■□□□□ 0.44
TSPAN3-208ENST00000560514 A8MX80 341 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 BUB1BO60566 1050 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 GPLD1P80108 840 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 BCL2L1Q07817 233 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 RALGDSQ12967 914 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 SQSTM1Q13501 440 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 SNAP47Q5SQN1 464 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 SLFN11Q7Z7L1 901 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 HEATR4Q86WZ0 1026 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 ZSWIM9Q86XI8 627 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 NRROSQ86YC3 692 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 OR10G6Q8NH81 332 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 GPT2Q8TD30 523 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 FAM172AQ8WUF8 416 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 PATE1Q8WXA2 126 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 PRDM8Q9NQV8 689 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 KIAA1468Q9P260 1216 aa17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 UTP20O75691 2785 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-208ENST00000560514 GOLGA6CA6NDK9 693 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 GOLGA6BA6NDN3 693 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 A8MU76 341 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 PPM1DO15297 605 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 CREB3O43889 395 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 GOLGA6DP0CG33 693 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 PRKCSHP14314 528 aaPredicted RBP17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 CSF2RBP32927 897 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 PTPN9P43378 593 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 UBE2HP62256 183 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 NOMO3P69849 1222 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 AFMIDQ63HM1 303 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 DPPA4Q7L190 304 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 SRLQ86TD4 932 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 NAGSQ8N159 534 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 NTAN1Q96AB6 310 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 NUS1Q96E22 293 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 SLC38A3Q99624 504 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 CTRCQ99895 268 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 KCTD5Q9NXV2 234 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 GOLGA6AQ9NYA3 693 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 DONSONQ9NYP3 566 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 TMEM9Q9P0T7 183 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 RWDD2AQ9UIY3 292 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 SUFUQ9UMX1 484 aa17.81■□□□□ 0.44
TSPAN3-208ENST00000560514 RP1L1Q8IWN7 2480 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 CACNA1DQ01668 2161 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 STK17BO94768 372 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 ACTR1BP42025 376 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 ACTR1AP61163 376 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 CTBSQ01459 385 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 MC2RQ01718 297 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 CRTC2Q53ET0 693 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 SCYL2Q6P3W7 929 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 CCDC13Q8IYE1 715 aa17.8■□□□□ 0.44
TSPAN3-208ENST00000560514 C2CD4BA6NLJ0 364 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 PALMO75781 387 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 CEACAM5P06731 702 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 MMEP08473 750 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 NR1D1P20393 614 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 CSNK1DP48730 415 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 HDAC4P56524 1084 aa17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 TPD52L1Q16890 204 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-208ENST00000560514 ATP1A1-AS1Q5TC04 95 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms