RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ZNF641Q96N77 438 aaPredicted RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 SPRY4Q9C004 299 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 KCNK4Q9NYG8 393 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 ST14Q9Y5Y6 855 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 GTPBP10A4D1E9 387 aaKnown RBP16.62■□□□□ 0.25
HERC1-207ENST00000560316 AGFG2O95081 481 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 MAP4P27816 1152 aaKnown RBP16.62■□□□□ 0.25
HERC1-207ENST00000560316 SDC4P31431 198 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 GNPDA1P46926 289 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 RAB15P59190 212 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 SEPT6Q14141 434 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 GRM3Q14832 879 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 NAA35Q5VZE5 725 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 NAGSQ8N159 534 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 STARD8Q92502 1023 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 ZMYND15Q9H091 742 aa16.62■□□□□ 0.25
HERC1-207ENST00000560316 UBA2Q9UBT2 640 aaPredicted RBP16.62■□□□□ 0.25
HERC1-207ENST00000560316 CFAP69A5D8W1 941 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 ENO4A6NNW6 628 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 A8MU76 341 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 CEACAM5P06731 702 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 MYCLP1P12525 358 aaPredicted RBP16.61■□□□□ 0.25
HERC1-207ENST00000560316 EPHB2P29323 1055 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 RGRP47804 291 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 HDAC4P56524 1084 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 RAPGEF1Q13905 1077 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 ACOX1Q15067 660 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 SNAP47Q5SQN1 464 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 KDELC2Q7Z4H8 507 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 NOP9Q86U38 636 aaKnown RBP16.61■□□□□ 0.25
HERC1-207ENST00000560316 ZNF761Q86XN6 746 aaPredicted RBP16.61■□□□□ 0.25
HERC1-207ENST00000560316 TEX19Q8NA77 164 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 MSANTD4Q8NCY6 345 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 JOSD2Q8TAC2 188 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 EFHD1Q9BUP0 239 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 MRPS18BQ9Y676 258 aaKnown RBP16.61■□□□□ 0.25
HERC1-207ENST00000560316 ITPR2Q14571 2701 aa16.61■□□□□ 0.25
HERC1-207ENST00000560316 J3KR12 359 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 PDE2AO00408 941 aaPredicted RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 MMEP08473 750 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 TCN2P20062 427 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 GNLYP22749 145 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 PPM1FP49593 454 aaPredicted RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 YBEYP58557 167 aaPredicted RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 NOMO3P69849 1222 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 CTBSQ01459 385 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 SQSTM1Q13501 440 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 AFMIDQ63HM1 303 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 SMYD5Q6GMV2 418 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 TMEM71Q6P5X7 295 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 ELOA2Q8IYF1 753 aaPredicted RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 FAM172AQ8WUF8 416 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 TEFMQ96QE5 360 aaKnown RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 TUBGCP5Q96RT8 1024 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 PDFQ9HBH1 243 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 TRNAU1APQ9NX07 287 aaKnown RBP16.6■□□□□ 0.25
HERC1-207ENST00000560316 SUFUQ9UMX1 484 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 PLEKHM1Q9Y4G2 1056 aa16.6■□□□□ 0.25
HERC1-207ENST00000560316 C2CD4BA6NLJ0 364 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 CREB3O43889 395 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 STK17BO94768 372 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 SERPINA4P29622 427 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 POLD2P49005 469 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 MC2RQ01718 297 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 MC1RQ01726 317 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 ABHD18Q0P651 414 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 PARP15Q460N3 678 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 FHL5Q5TD97 284 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 DPY19L2P1Q6NXN4 242 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 DPPA4Q7L190 304 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 STRADAQ7RTN6 431 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 SRLQ86TD4 932 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 HEATR4Q86WZ0 1026 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 PAF1Q8N7H5 531 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 RNF31Q96EP0 1072 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 DPYSL5Q9BPU6 564 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 FRMD8Q9BZ67 464 aaPredicted RBP16.59■□□□□ 0.25
HERC1-207ENST00000560316 ATP13A3Q9H7F0 1226 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 APMAPQ9HDC9 416 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 PHPT1Q9NRX4 125 aaPredicted RBP16.59■□□□□ 0.25
HERC1-207ENST00000560316 FHOD1Q9Y613 1164 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 KCNMB2Q9Y691 235 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 CACNA1DQ01668 2161 aa16.59■□□□□ 0.25
HERC1-207ENST00000560316 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 VPS4BO75351 444 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 RNF224P0DH78 156 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 PTPN9P43378 593 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
HERC1-207ENST00000560316 CAPRIN2Q6IMN6 1127 aaKnown RBP16.58■□□□□ 0.24
HERC1-207ENST00000560316 CEACAM20Q6UY09 585 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 ASB18Q6ZVZ8 466 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 SLFN11Q7Z7L1 901 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 TSEN2Q8NCE0 465 aaKnown RBP16.58■□□□□ 0.24
HERC1-207ENST00000560316 CENPIQ92674 756 aaPredicted RBP16.58■□□□□ 0.24
HERC1-207ENST00000560316 NTAN1Q96AB6 310 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 ECHDC3Q96DC8 303 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 NUS1Q96E22 293 aa16.58■□□□□ 0.24
HERC1-207ENST00000560316 AHCYL2Q96HN2 611 aaKnown RBP16.58■□□□□ 0.24
HERC1-207ENST00000560316 COQ10AQ96MF6 247 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms