RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 A8MX80 341 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 ANKRD66B4E2M5 251 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 LMO7DNF2Z398 122 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 AQP9O43315 295 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 GCATO75600 419 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 PROS1P07225 676 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 TNNT1P13805 278 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 PECAM1P16284 738 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-213ENST00000560175 BLKP51451 505 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 HK3P52790 923 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 PPARDQ03181 441 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 ITKQ08881 620 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 AP1B1Q10567 949 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 WASHC5Q12768 1159 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 CAMK2BQ13554 666 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 ALG11Q2TAA5 492 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 LVRNQ6Q4G3 990 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 USP45Q70EL2 814 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 TMPRSS12Q86WS5 348 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 PHACTR4Q8IZ21 702 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 GALNT15Q8N3T1 639 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 APOLD1Q96LR9 279 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 BOCQ9BWV1 1114 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 TEX101Q9BY14 249 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 CLPBQ9H078 707 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 TCEAL2Q9H3H9 227 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-213ENST00000560175 PCDH9Q9HC56 1237 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 DNPEPQ9ULA0 475 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 CHKBQ9Y259 395 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 OR1A2Q9Y585 309 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 RP1P56715 2156 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 DMXL2Q8TDJ6 3036 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
SMAD3-213ENST00000560175 TMEM202A6NGA9 273 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 CAPN8A6NHC0 703 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 HACD1B0YJ81 288 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 MTSS1O43312 755 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 RFPL3O75679 317 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 NEBLO76041 1014 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 ALPIP09923 528 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 ALPPL2P10696 532 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 TSHRP16473 764 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 CA4P22748 312 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 PTPN3P26045 913 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 HTR1BP28222 390 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 CD68P34810 354 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-213ENST00000560175 STC1P52823 247 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 XRCC4Q13426 336 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 ACOX1Q15067 660 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 QPCTQ16769 361 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 ZCCHC8Q6NZY4 707 aaKnown RBP13.21□□□□□ -0.29
SMAD3-213ENST00000560175 Q6ZVL8 140 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 ZNF765Q7L2R6 523 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 NRSN1Q8IZ57 195 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 RBFAQ8N0V3 343 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 SPC24Q8NBT2 197 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 ATL2Q8NHH9 583 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 TFB1MQ8WVM0 346 aaKnown RBP13.21□□□□□ -0.29
SMAD3-213ENST00000560175 UBE2Q2Q8WVN8 375 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 P3H4Q92791 437 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 WDR92Q96MX6 357 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 SMIM14Q96QK8 99 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 RBM15Q96T37 977 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMAD3-213ENST00000560175 VAT1Q99536 393 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 HERPUD2Q9BSE4 406 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 LRRC61Q9BV99 259 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 LGR4Q9BXB1 951 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.29
SMAD3-213ENST00000560175 IGF2RP11717 2491 aa13.21□□□□□ -0.29
SMAD3-213ENST00000560175 COL27A1Q8IZC6 1860 aaPredicted RBP13.21□□□□□ -0.3
SMAD3-213ENST00000560175 A0A0U1RQJ8 604 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 TMEM8BA6NDV4 472 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 C1QTNF9BB2RNN3 333 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 YY2O15391 372 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 RASGRP1O95267 797 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 SOD1P00441 154 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 APOC2P02655 101 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 PCCBP05166 539 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 GP1BAP07359 652 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 C1QTNF9P0C862 333 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 CTPS1P17812 591 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 ETV3P41162 512 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 CD86P42081 329 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 GSDMDP57764 484 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 DYNLT1P63172 113 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 E2F1Q01094 437 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 ARHGEF7Q14155 803 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 LRRC66Q68CR7 880 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 KCTD16Q68DU8 428 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 ENPP7Q6UWV6 458 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 DHRS13Q6UX07 377 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms